RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 FBLN5Q9UBX5 448 aa6.88□□□□□ -1.31
ITGB1-208ENST00000464001 PLA2G1BP04054 148 aaKnown RBP6.87□□□□□ -1.31
ITGB1-208ENST00000464001 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
ITGB1-208ENST00000464001 VWA3BQ502W6 1294 aa6.87□□□□□ -1.31
ITGB1-208ENST00000464001 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
ITGB1-208ENST00000464001 GTF2IRD2BQ6EKJ0 949 aa6.87□□□□□ -1.31
ITGB1-208ENST00000464001 FRMD5Q7Z6J6 570 aa6.87□□□□□ -1.31
ITGB1-208ENST00000464001 SAPCD2Q86UD0 394 aa6.87□□□□□ -1.31
ITGB1-208ENST00000464001 GTF2IRD2Q86UP8 949 aa6.87□□□□□ -1.31
ITGB1-208ENST00000464001 SMAD7O15105 426 aaKnown RBP6.86□□□□□ -1.31
ITGB1-208ENST00000464001 NTRK1P04629 796 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 THBDP07204 575 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 ERCC5P28715 1186 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-208ENST00000464001 MC3RP41968 323 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 HTRA3P83110 453 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 CACNB2Q08289 660 aaPredicted RBP6.86□□□□□ -1.31
ITGB1-208ENST00000464001 GNL2Q13823 731 aaKnown RBP6.86□□□□□ -1.31
ITGB1-208ENST00000464001 IQCEQ6IPM2 695 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 LIPIQ6XZB0 460 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 DCP2Q8IU60 420 aaKnown RBP6.86□□□□□ -1.31
ITGB1-208ENST00000464001 MRGPRX3Q96LB0 322 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 NKX2-4Q9H2Z4 354 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 BCAS3Q9H6U6 928 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 ACTR10Q9NZ32 417 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 MARCH2Q9P0N8 246 aa6.86□□□□□ -1.31
ITGB1-208ENST00000464001 SH3D21A4FU49 640 aa6.85□□□□□ -1.31
ITGB1-208ENST00000464001 PLEKHO2Q8TD55 490 aa6.85□□□□□ -1.31
ITGB1-208ENST00000464001 AP5M1Q9H0R1 490 aa6.85□□□□□ -1.31
ITGB1-208ENST00000464001 MRVI1Q9Y6F6 885 aa6.85□□□□□ -1.31
ITGB1-208ENST00000464001 CELA3BP08861 270 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 SV2CQ496J9 727 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 LARP1BQ659C4 914 aaKnown RBP6.84□□□□□ -1.31
ITGB1-208ENST00000464001 C6orf15Q6UXA7 325 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-208ENST00000464001 FAM178BQ8IXR5 827 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 ADGRG2Q8IZP9 1017 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 SMARCC2Q8TAQ2 1214 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 ZNF526Q8TF50 670 aaPredicted RBP6.84□□□□□ -1.31
ITGB1-208ENST00000464001 ADAM7Q9H2U9 754 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 PCDH18Q9HCL0 1135 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 LRP2BPQ9P2M1 347 aa6.84□□□□□ -1.31
ITGB1-208ENST00000464001 A0A1B0GTL3 188 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 HOXC12P31275 282 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 E4F1Q66K89 784 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-208ENST00000464001 MBLAC2Q68D91 279 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 TTLL7Q6ZT98 887 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 NPLOC4Q8TAT6 608 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 FRS2Q8WU20 508 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 DPF3Q92784 378 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 CCDC140Q96MF4 163 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 SPATA25Q9BR10 227 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 USP40Q9NVE5 1235 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 BTG4Q9NY30 223 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 PRKAG3Q9UGI9 489 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 SIT1Q9Y3P8 196 aa6.83□□□□□ -1.32
ITGB1-208ENST00000464001 TIMM13Q9Y5L4 95 aaPredicted RBP6.83□□□□□ -1.32
ITGB1-208ENST00000464001 C22orf46C9J442 243 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 DDAH1O94760 285 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 GTF2A2P52657 109 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 RPL11P62913 178 aaKnown RBP6.82□□□□□ -1.32
ITGB1-208ENST00000464001 FXNQ16595 210 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 INF2Q27J81 1249 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 TEX2Q8IWB9 1127 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 CARFQ8N187 725 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 BTN2A2Q8WVV5 523 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 SEC14L1Q92503 715 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 DIO2Q92813 273 aa6.82□□□□□ -1.32
ITGB1-208ENST00000464001 MEFVO15553 781 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-208ENST00000464001 SMARCA5O60264 1052 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-208ENST00000464001 CPP00450 1065 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 ITGAVP06756 1048 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 SNRPB2P08579 225 aaKnown RBP6.81□□□□□ -1.32
ITGB1-208ENST00000464001 CYP2C8P10632 490 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 DLX2Q07687 328 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-208ENST00000464001 SKOR2Q2VWA4 1001 aaPredicted RBP6.81□□□□□ -1.32
ITGB1-208ENST00000464001 ZFYVE27Q5T4F4 411 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 NT5DC1Q5TFE4 455 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 MROH9Q5TGP6 573 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 ETV3LQ6ZN32 361 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 ZNF227Q86WZ6 799 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 ZBTB8AQ96BR9 441 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 NOX5Q96PH1 765 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.81□□□□□ -1.32
ITGB1-208ENST00000464001 LGR4Q9BXB1 951 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 NTMQ9P121 344 aa6.81□□□□□ -1.32
ITGB1-208ENST00000464001 SGSM2O43147 1006 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 MYO1BO43795 1136 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 SUSD5O60279 629 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 ECI1P42126 302 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 SLC6A11P48066 632 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 SARSP49591 514 aaKnown RBP6.8□□□□□ -1.32
ITGB1-208ENST00000464001 KCNAB2Q13303 367 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 CEP68Q76N32 757 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 DDX11Q96FC9 970 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 TRMT2BQ96GJ1 504 aaKnown RBP6.8□□□□□ -1.32
ITGB1-208ENST00000464001 KRTAP4-2Q9BYR5 136 aa6.8□□□□□ -1.32
ITGB1-208ENST00000464001 B2RBV5 119 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 SCG5P05408 212 aa6.79□□□□□ -1.32
ITGB1-208ENST00000464001 TCF3P15923 654 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms