RNA–Protein interactions for RNA: ENST00000463784.5

IRF1-207, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-207ENST00000463784 PXMP2Q9NR77 195 aa23.5■■□□□ 1.35
IRF1-207ENST00000463784 GTF3C3Q9Y5Q9 886 aa23.5■■□□□ 1.35
IRF1-207ENST00000463784 DDX49Q9Y6V7 483 aaKnown RBP23.5■■□□□ 1.35
IRF1-207ENST00000463784 NR3C2P08235 984 aa23.49■■□□□ 1.35
IRF1-207ENST00000463784 COL6A1P12109 1028 aa23.49■■□□□ 1.35
IRF1-207ENST00000463784 EIF2AK2P19525 551 aaKnown RBP23.49■■□□□ 1.35
IRF1-207ENST00000463784 CPLX2Q6PUV4 134 aaKnown RBP23.49■■□□□ 1.35
IRF1-207ENST00000463784 SENP6Q9GZR1 1112 aaPredicted RBP23.49■■□□□ 1.35
IRF1-207ENST00000463784 AP5M1Q9H0R1 490 aa23.49■■□□□ 1.35
IRF1-207ENST00000463784 UPF2Q9HAU5 1272 aaKnown RBP23.49■■□□□ 1.35
IRF1-207ENST00000463784 PDGFCQ9NRA1 345 aa23.49■■□□□ 1.35
IRF1-207ENST00000463784 Q9Y3F1 56 aa23.49■■□□□ 1.35
IRF1-207ENST00000463784 PIK3CDO00329 1044 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 CPLX1O14810 134 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 EIF3JO75822 258 aaKnown RBP23.48■■□□□ 1.35
IRF1-207ENST00000463784 CCT2P78371 535 aaKnown RBP23.48■■□□□ 1.35
IRF1-207ENST00000463784 PPP1R18Q6NYC8 613 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 TEX2Q8IWB9 1127 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 SCFD2Q8WU76 684 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 LENG1Q96BZ8 264 aaPredicted RBP23.48■■□□□ 1.35
IRF1-207ENST00000463784 TSEN34Q9BSV6 310 aaKnown RBP23.48■■□□□ 1.35
IRF1-207ENST00000463784 WDR11Q9BZH6 1224 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 MYH6P13533 1939 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 SYNRGQ9UMZ2 1314 aa23.48■■□□□ 1.35
IRF1-207ENST00000463784 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.47■■□□□ 1.35
IRF1-207ENST00000463784 RBM47A0AV96 593 aaKnown RBP23.47■■□□□ 1.35
IRF1-207ENST00000463784 PRPF3O43395 683 aaKnown RBP23.47■■□□□ 1.35
IRF1-207ENST00000463784 ADAMTS4O75173 837 aa23.47■■□□□ 1.35
IRF1-207ENST00000463784 C6orf222P0C671 652 aaPredicted RBP23.47■■□□□ 1.35
IRF1-207ENST00000463784 SMPD1P17405 629 aa23.47■■□□□ 1.35
IRF1-207ENST00000463784 NAPAP54920 295 aa23.47■■□□□ 1.35
IRF1-207ENST00000463784 GJA9P57773 515 aa23.47■■□□□ 1.35
IRF1-207ENST00000463784 DUSP28Q4G0W2 176 aa23.47■■□□□ 1.35
IRF1-207ENST00000463784 PCSK9Q8NBP7 692 aaKnown RBP23.47■■□□□ 1.35
IRF1-207ENST00000463784 GPKOWQ92917 476 aaPredicted RBP eCLIP23.47■■□□□ 1.35
IRF1-207ENST00000463784 PDCD2LQ9BRP1 358 aa23.47■■□□□ 1.35
IRF1-207ENST00000463784 NKRFO15226 690 aaKnown RBP eCLIP23.46■■□□□ 1.35
IRF1-207ENST00000463784 EVI5O60447 810 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 IFNAR1P17181 557 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 NEK4P51957 841 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 TTLL4Q14679 1199 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 PFKFB3Q16875 520 aaPredicted RBP23.46■■□□□ 1.35
IRF1-207ENST00000463784 WWC2Q6AWC2 1192 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 USP17L6PQ6QN14 398 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 LARP6Q9BRS8 491 aaKnown RBP23.46■■□□□ 1.35
IRF1-207ENST00000463784 RNF26Q9BY78 433 aaPredicted RBP23.46■■□□□ 1.35
IRF1-207ENST00000463784 GLT8D2Q9H1C3 349 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 UPF3AQ9H1J1 476 aaKnown RBP23.46■■□□□ 1.35
IRF1-207ENST00000463784 BARHL2Q9NY43 387 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 BAZ2BQ9UIF8 2168 aaKnown RBP23.46■■□□□ 1.35
IRF1-207ENST00000463784 GNEQ9Y223 722 aaKnown RBP23.46■■□□□ 1.35
IRF1-207ENST00000463784 NR2E3Q9Y5X4 410 aa23.46■■□□□ 1.35
IRF1-207ENST00000463784 MOXD2PA6NHM9 499 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 MEIS2O14770 477 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 DYNC1LI2O43237 492 aaPredicted RBP23.45■■□□□ 1.34
IRF1-207ENST00000463784 ADCY6O43306 1168 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 ZEB2O60315 1214 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 MYCLP12524 364 aaPredicted RBP23.45■■□□□ 1.34
IRF1-207ENST00000463784 SCG2P13521 617 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 CST5P28325 142 aaPredicted RBP23.45■■□□□ 1.34
IRF1-207ENST00000463784 CCND2P30279 289 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 PGM5Q15124 567 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 GNASQ5JWF2 1037 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 TLK2Q86UE8 772 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 VSIG10LQ86VR7 867 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 TRIM22Q8IYM9 498 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 KLHDC9Q8NEP7 349 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 CCDC12Q8WUD4 166 aaPredicted RBP23.45■■□□□ 1.34
IRF1-207ENST00000463784 SLKQ9H2G2 1235 aaPredicted RBP23.45■■□□□ 1.34
IRF1-207ENST00000463784 NCOA5Q9HCD5 579 aaKnown RBP23.45■■□□□ 1.34
IRF1-207ENST00000463784 PHF24Q9UPV7 400 aa23.45■■□□□ 1.34
IRF1-207ENST00000463784 TXNP10599 105 aaKnown RBP23.44■■□□□ 1.34
IRF1-207ENST00000463784 AK2P54819 239 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 NKX3-2P78367 333 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 STK3Q13188 491 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 NTRK3Q16288 839 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 SEPT14Q6ZU15 432 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 SLC26A6Q9BXS9 759 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 C22orf23Q9BZE7 217 aa23.44■■□□□ 1.34
IRF1-207ENST00000463784 SMCO2A6NFE2 343 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 SPDYE3A6NKU9 549 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 STAM2O75886 525 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 SSRP1Q08945 709 aaKnown RBP23.43■■□□□ 1.34
IRF1-207ENST00000463784 KCNA10Q16322 511 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 BRDTQ58F21 947 aaPredicted RBP23.43■■□□□ 1.34
IRF1-207ENST00000463784 KCNV1Q6PIU1 500 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 PHKBQ93100 1093 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 EHMT1Q9H9B1 1298 aa23.43■■□□□ 1.34
IRF1-207ENST00000463784 LCTP09848 1927 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 STXBP3O00186 592 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 CDKL5O76039 1030 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 ADCY7P51828 1080 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 ACLYP53396 1101 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 XRRA1Q6P2D8 792 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 FERMT2Q96AC1 680 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 RIC8AQ9NPQ8 531 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 TPCN1Q9ULQ1 816 aa23.42■■□□□ 1.34
IRF1-207ENST00000463784 FSCN1Q16658 493 aaKnown RBP23.41■■□□□ 1.34
IRF1-207ENST00000463784 GNPTABQ3T906 1256 aa23.41■■□□□ 1.34
IRF1-207ENST00000463784 SLC39A5Q6ZMH5 540 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms