RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SF3A3Q12874 501 aaKnown RBP eCLIP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 NOGQ13253 232 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 STX1AQ16623 288 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 KIF4BQ2VIQ3 1234 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 FKBP15Q5T1M5 1219 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ATL3Q6DD88 541 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 MTHFD1LQ6UB35 978 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 DHX40Q8IX18 779 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 OGFOD1Q8N543 542 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 USHBP1Q8N6Y0 703 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 SMCR8Q8TEV9 937 aaPredicted RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF570Q96NI8 536 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 NOD2Q9HC29 1040 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 ZNHIT6Q9NWK9 470 aaKnown RBP4.02□□□□□ -1.77
COL8A1-205ENST00000463753 HPCAL4Q9UM19 191 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 C15orf41Q9Y2V0 281 aa4.02□□□□□ -1.77
COL8A1-205ENST00000463753 PSME4Q14997 1843 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 COL1A1P02452 1464 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CD163L1Q9NR16 1453 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 LRRD1A4D1F6 860 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 SUPT3HO75486 399 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 ATP6V1G2O95670 118 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 SESN3P58005 492 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 NR1H3Q13133 447 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 DGKZQ13574 1117 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CUL4BQ13620 913 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 LAPTM4AQ15012 233 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 PPP1R7Q15435 360 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC92Q53HC0 331 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 ZNF697Q5TEC3 545 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 KCTD16Q68DU8 428 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 HIBCHQ6NVY1 386 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 BPHLQ86WA6 291 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 PALB2Q86YC2 1186 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 NLGN1Q8N2Q7 840 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 GALNT15Q8N3T1 639 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 TMCO5AQ8N6Q1 288 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 ATP11CQ8NB49 1132 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 KCNH5Q8NCM2 988 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 NOC3LQ8WTT2 800 aaKnown RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 RILPL2Q969X0 211 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CLIP3Q96DZ5 547 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 ACSBG1Q96GR2 724 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 COL25A1Q9BXS0 654 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 OSBPL5Q9H0X9 879 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 PCMTD2Q9NV79 361 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 ZFATQ9P243 1243 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 IMPACTQ9P2X3 320 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 MTMR6Q9Y217 621 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 TMEM98Q9Y2Y6 226 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 TTC21BQ7Z4L5 1316 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 TTC21AQ8NDW8 1320 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 DPPA5A6NC42 116 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 N4BP3O15049 544 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 MAP4K4O95819 1239 aaPredicted RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 PDHA1P08559 390 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CPA1P15085 419 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 SOX11P35716 441 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 SEC24CP53992 1094 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 HDLBPQ00341 1268 aaKnown RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 DEUP1Q05D60 604 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 DCTN1Q14203 1278 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 IMMTQ16891 758 aaKnown RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 WASHC4Q2M389 1173 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 MAP7D1Q3KQU3 841 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 NAA35Q5VZE5 725 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 NUGGCQ68CJ6 796 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 TOGARAM2Q6ZUX3 1019 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC80Q76M96 950 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 PTF1AQ7RTS3 328 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 SIRT2Q8IXJ6 389 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 IQCF2Q8IXL9 164 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC24Q8N4L8 307 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 SH2D3CQ8N5H7 860 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 NEK9Q8TD19 979 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 TEKT1Q969V4 418 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 UTP6Q9NYH9 597 aaKnown RBP4.01□□□□□ -1.77
COL8A1-205ENST00000463753 RAB21Q9UL25 225 aa4.01□□□□□ -1.77
COL8A1-205ENST00000463753 CTAGE15A4D2H0 777 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 ZBBXA8MT70 800 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 POTECB2RU33 542 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 E7EVH7 732 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 BIN1O00499 593 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 NRG2O14511 850 aaPredicted RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 KRT38O76015 456 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 GFPT2O94808 682 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 AVPP01185 164 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 VIL1P09327 827 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 CTAGE8P0CG41 777 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 LMOD1P29536 600 aaPredicted RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 CTHP32929 405 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 FKBP1BP68106 108 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 GUCY1A3Q02108 690 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 SPRED3Q2MJR0 410 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CCDC57Q2TAC2 916 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 LARP1BQ659C4 914 aaKnown RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 APBB1IPQ7Z5R6 666 aaPredicted RBP4□□□□□ -1.77
COL8A1-205ENST00000463753 CTAGE6Q86UF2 777 aa4□□□□□ -1.77
COL8A1-205ENST00000463753 CTAGE4Q8IX94 777 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms