RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 IRX5P78411 483 aaPredicted RBP20.42■□□□□ 0.86
VPS52-214ENST00000463486 LRRC41Q15345 812 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 PKN1Q16512 942 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 NSUN6Q8TEA1 469 aaKnown RBP20.42■□□□□ 0.86
VPS52-214ENST00000463486 GPKOWQ92917 476 aaPredicted RBP eCLIP20.42■□□□□ 0.86
VPS52-214ENST00000463486 IWS1Q96ST2 819 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 PXMP2Q9NR77 195 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 TPCN1Q9ULQ1 816 aa20.42■□□□□ 0.86
VPS52-214ENST00000463486 IFNAR1P17181 557 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 SMPD1P17405 629 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 AK2P54819 239 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 GJC2Q5T442 439 aaPredicted RBP20.41■□□□□ 0.86
VPS52-214ENST00000463486 CCSAPQ6IQ19 270 aaPredicted RBP20.41■□□□□ 0.86
VPS52-214ENST00000463486 USP17L6PQ6QN14 398 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 NECAB2Q7Z6G3 386 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 KLHDC9Q8NEP7 349 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 PDCD2LQ9BRP1 358 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 UPF3AQ9H1J1 476 aaKnown RBP20.41■□□□□ 0.86
VPS52-214ENST00000463486 XPNPEP3Q9NQH7 507 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 FRMPD4Q14CM0 1322 aa20.41■□□□□ 0.86
VPS52-214ENST00000463486 STXBP3O00186 592 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 DNM1LO00429 736 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 PRPF3O43395 683 aaKnown RBP20.4■□□□□ 0.86
VPS52-214ENST00000463486 PGK1P00558 417 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 NR3C2P08235 984 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 EIF2AK2P19525 551 aaKnown RBP20.4■□□□□ 0.86
VPS52-214ENST00000463486 RBM25P49756 843 aaKnown RBP20.4■□□□□ 0.86
VPS52-214ENST00000463486 TNFAIP2Q03169 654 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 PDE4DQ08499 809 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 PFKFB3Q16875 520 aaPredicted RBP20.4■□□□□ 0.86
VPS52-214ENST00000463486 IQSEC1Q6DN90 963 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 HEATR3Q7Z4Q2 680 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 ARRDC4Q8NCT1 418 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 IL31RAQ8NI17 732 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 PHKBQ93100 1093 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 SYNRGQ9UMZ2 1314 aa20.4■□□□□ 0.86
VPS52-214ENST00000463486 MYADML2A6NDP7 307 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 RGS20O76081 388 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 GJA9P57773 515 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 VSIG10LQ86VR7 867 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 C11orf49Q9H6J7 331 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 PSTPIP2Q9H939 334 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 BARHL2Q9NY43 387 aa20.39■□□□□ 0.85
VPS52-214ENST00000463486 PFKFB2O60825 505 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 PPFIA3O75145 1194 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 NEK4P51957 841 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 PGM5Q15124 567 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 ARHGEF16Q5VV41 709 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 CCDC62Q6P9F0 684 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 FCHSD1Q86WN1 690 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 C22orf23Q9BZE7 217 aa20.38■□□□□ 0.85
VPS52-214ENST00000463486 hCG_1984214I3L0E3 225 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 EIF3JO75822 258 aaKnown RBP20.37■□□□□ 0.85
VPS52-214ENST00000463486 ARIH2O95376 493 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 SCG2P13521 617 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 CST5P28325 142 aaPredicted RBP20.37■□□□□ 0.85
VPS52-214ENST00000463486 SCRN1Q12765 414 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 STXBP2Q15833 593 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 DUSP28Q4G0W2 176 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 PPP1R18Q6NYC8 613 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 ZNF713Q8N859 430 aaPredicted RBP20.37■□□□□ 0.85
VPS52-214ENST00000463486 RNF26Q9BY78 433 aaPredicted RBP20.37■□□□□ 0.85
VPS52-214ENST00000463486 WDR11Q9BZH6 1224 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 PHF24Q9UPV7 400 aa20.37■□□□□ 0.85
VPS52-214ENST00000463486 B4DLN1 442 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 ADAMTS3O15072 1205 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 LARGE1O95461 756 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 MRPL12P52815 198 aaKnown RBP20.36■□□□□ 0.85
VPS52-214ENST00000463486 MRPS9P82933 396 aaKnown RBP20.36■□□□□ 0.85
VPS52-214ENST00000463486 STK3Q13188 491 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 ANKRD1Q15327 319 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 MPHOSPH6Q99547 160 aaKnown RBP20.36■□□□□ 0.85
VPS52-214ENST00000463486 RIC8AQ9NPQ8 531 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 Q9Y3F1 56 aa20.36■□□□□ 0.85
VPS52-214ENST00000463486 ALPK3Q96L96 1907 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 CTDNEP1O95476 244 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 NAPAP54920 295 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 UBE2SQ16763 222 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 ME3Q16798 604 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 RNF180Q86T96 592 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 TEX2Q8IWB9 1127 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 SCFD2Q8WU76 684 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 TSEN34Q9BSV6 310 aaKnown RBP20.35■□□□□ 0.85
VPS52-214ENST00000463486 SLC26A6Q9BXS9 759 aa20.35■□□□□ 0.85
VPS52-214ENST00000463486 DYNC1LI2O43237 492 aaPredicted RBP20.34■□□□□ 0.85
VPS52-214ENST00000463486 CLK2P49760 499 aaKnown RBP20.34■□□□□ 0.85
VPS52-214ENST00000463486 KCNA10Q16322 511 aa20.34■□□□□ 0.85
VPS52-214ENST00000463486 LRRC26Q2I0M4 334 aa20.34■□□□□ 0.85
VPS52-214ENST00000463486 TLK2Q86UE8 772 aa20.34■□□□□ 0.85
VPS52-214ENST00000463486 SMARCC2Q8TAQ2 1214 aa20.34■□□□□ 0.85
VPS52-214ENST00000463486 ZFP91Q96JP5 570 aaPredicted RBP20.34■□□□□ 0.85
VPS52-214ENST00000463486 SENP6Q9GZR1 1112 aaPredicted RBP20.34■□□□□ 0.85
VPS52-214ENST00000463486 RBM27Q9P2N5 1060 aaKnown RBP20.34■□□□□ 0.85
VPS52-214ENST00000463486 ESYT2A0FGR8 921 aa20.33■□□□□ 0.85
VPS52-214ENST00000463486 SMCO2A6NFE2 343 aa20.33■□□□□ 0.85
VPS52-214ENST00000463486 KBTBD13C9JR72 458 aa20.33■□□□□ 0.85
VPS52-214ENST00000463486 MYCLP12524 364 aaPredicted RBP20.33■□□□□ 0.85
VPS52-214ENST00000463486 ACLYP53396 1101 aa20.33■□□□□ 0.85
VPS52-214ENST00000463486 BEX3Q00994 111 aa20.33■□□□□ 0.85
VPS52-214ENST00000463486 ST3GAL1Q11201 340 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms