RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 TMCO2Q7Z6W1 182 aaPredicted RBP6.67□□□□□ -1.34
CCR9-205ENST00000463197 TMEM199Q8N511 208 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 PNMA1Q8ND90 353 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 RGS22Q8NE09 1264 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 DHX38Q92620 1227 aaKnown RBP6.67□□□□□ -1.34
CCR9-205ENST00000463197 GPKOWQ92917 476 aaPredicted RBP eCLIP6.67□□□□□ -1.34
CCR9-205ENST00000463197 WNT8BQ93098 351 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 MTMR8Q96EF0 704 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 ZSCAN10Q96SZ4 725 aaPredicted RBP6.67□□□□□ -1.34
CCR9-205ENST00000463197 AP5M1Q9H0R1 490 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 NKX2-4Q9H2Z4 354 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 SPC25Q9HBM1 224 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 VAT1LQ9HCJ6 419 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 RNF216Q9NWF9 866 aaPredicted RBP6.67□□□□□ -1.34
CCR9-205ENST00000463197 SUPT16HQ9Y5B9 1047 aaKnown RBP6.67□□□□□ -1.34
CCR9-205ENST00000463197 MYH8P13535 1937 aa6.67□□□□□ -1.34
CCR9-205ENST00000463197 MYH4Q9Y623 1939 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 CYTH3O43739 400 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 CABYRO75952 493 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 NEFLP07196 543 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 MYL3P08590 195 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 IQCF3P0C7M6 154 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 TXNP10599 105 aaKnown RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 ZNF200P98182 395 aaPredicted RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 ARHGAP1Q07960 439 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 CCDC85BQ15834 202 aaPredicted RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 CDC37Q16543 378 aaPredicted RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 QRICH1Q2TAL8 776 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 KRT40Q6A162 431 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 GDF6Q6KF10 455 aaPredicted RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 TRAF7Q6Q0C0 670 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 STOX1Q6ZVD7 989 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 DEFB128Q7Z7B8 93 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 SKAP1Q86WV1 359 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 TICAM2Q86XR7 235 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 OR6J1Q8NGC5 347 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 AFG1LQ8WV93 481 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 PPM1EQ8WY54 764 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 DSCC1Q9BVC3 393 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 RWDD1Q9H446 243 aaPredicted RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 GPHNQ9NQX3 736 aaPredicted RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 MAD2L2Q9UI95 211 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 DDX41Q9UJV9 622 aaKnown RBP6.66□□□□□ -1.34
CCR9-205ENST00000463197 LRRC37A2A6NM11 1700 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 TNKSO95271 1327 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 MROH7Q68CQ1 1323 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 WDR19Q8NEZ3 1342 aa6.66□□□□□ -1.34
CCR9-205ENST00000463197 TRANK1O15050 2925 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 TMEM265A0A087WTH1 108 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 PALM3A6NDB9 673 aaPredicted RBP6.65□□□□□ -1.34
CCR9-205ENST00000463197 TLR3O15455 904 aaKnown RBP6.65□□□□□ -1.34
CCR9-205ENST00000463197 SORBS3O60504 671 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 CYP21A2P08686 494 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 IRX6P78412 446 aaPredicted RBP6.65□□□□□ -1.34
CCR9-205ENST00000463197 MBTPS1Q14703 1052 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 PPP4R3BQ5MIZ7 849 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 SEPT14Q6ZU15 432 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 CHST3Q7LGC8 479 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 DNERQ8NFT8 737 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 IL31RAQ8NI17 732 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 ESR2Q92731 530 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 MTG1Q9BT17 334 aaPredicted RBP6.65□□□□□ -1.34
CCR9-205ENST00000463197 CERS4Q9HA82 394 aa6.65□□□□□ -1.34
CCR9-205ENST00000463197 ADD3Q9UEY8 706 aaKnown RBP6.65□□□□□ -1.34
CCR9-205ENST00000463197 MCM3APO60318 1980 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 LOC102724159A0A0B4J2E5 919 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 LCHNA4D1U4 455 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 HAS3O00219 553 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 ZEB2O60315 1214 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 LPXNO60711 386 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 NBNO60934 754 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 NR3C2P08235 984 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 MMP3P08254 477 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 PCP11498 1178 aaKnown RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 EIF2AK2P19525 551 aaKnown RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 CHMLP26374 656 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 HOXA13P31271 388 aaPredicted RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 HSD17B4P51659 736 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 ANTXR2P58335 489 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 GHRHRQ02643 423 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 PDE4DQ08499 809 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 PWP2Q15269 919 aaKnown RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 TRIM71Q2Q1W2 868 aaKnown RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 GPATCH4Q5T3I0 446 aaKnown RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 TTC22Q5TAA0 569 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 NFRKBQ6P4R8 1299 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 PSRC1Q6PGN9 363 aaPredicted RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 IGDCC4Q8TDY8 1250 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 SCFD2Q8WU76 684 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 RMDN3Q96TC7 470 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 RNF41Q9H4P4 317 aaPredicted RBP6.64□□□□□ -1.35
CCR9-205ENST00000463197 PXMP2Q9NR77 195 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 POLR3EQ9NVU0 708 aa6.64□□□□□ -1.35
CCR9-205ENST00000463197 KLRF2D3W0D1 207 aa6.63□□□□□ -1.35
CCR9-205ENST00000463197 ABCB11O95342 1321 aa6.63□□□□□ -1.35
CCR9-205ENST00000463197 CA3P07451 260 aa6.63□□□□□ -1.35
CCR9-205ENST00000463197 PARP1P09874 1014 aaKnown RBP6.63□□□□□ -1.35
CCR9-205ENST00000463197 BMP1P13497 986 aa6.63□□□□□ -1.35
CCR9-205ENST00000463197 CPT1AP50416 773 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms