RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 DCAF15Q66K64 600 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 BRF1Q92994 677 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 NOX5Q96PH1 765 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 ZNRF3Q9ULT6 936 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 TSC22D4Q9Y3Q8 395 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 ZNF536O15090 1300 aa6.39□□□□□ -1.39
USH2A-203ENST00000463147 OVOL3O00110 214 aa6.38□□□□□ -1.39
USH2A-203ENST00000463147 ACRP10323 421 aa6.38□□□□□ -1.39
USH2A-203ENST00000463147 AXDND1Q5T1B0 1012 aaPredicted RBP6.38□□□□□ -1.39
USH2A-203ENST00000463147 PLEKHH3Q7Z736 793 aa6.38□□□□□ -1.39
USH2A-203ENST00000463147 FAM177A1Q8N128 213 aaPredicted RBP6.38□□□□□ -1.39
USH2A-203ENST00000463147 TTLL6Q8N841 843 aa6.38□□□□□ -1.39
USH2A-203ENST00000463147 INVSQ9Y283 1065 aa6.38□□□□□ -1.39
USH2A-203ENST00000463147 FZD7O75084 574 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 IFNGR1P15260 489 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 TDRD10Q5VZ19 366 aaKnown RBP6.37□□□□□ -1.39
USH2A-203ENST00000463147 NT5DC4Q86YG4 428 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 KYQ8NBH2 561 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 USP33Q8TEY7 942 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 MRIQ9BWK5 157 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 SLITRK6Q9H5Y7 841 aa6.37□□□□□ -1.39
USH2A-203ENST00000463147 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
USH2A-203ENST00000463147 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.37□□□□□ -1.39
USH2A-203ENST00000463147 THBS2P35442 1172 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 SEPHS1P49903 392 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 SMAD4Q13485 552 aaKnown RBP6.36□□□□□ -1.39
USH2A-203ENST00000463147 WWC2Q6AWC2 1192 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 ZC3H18Q86VM9 953 aaKnown RBP6.36□□□□□ -1.39
USH2A-203ENST00000463147 DCP2Q8IU60 420 aaKnown RBP6.36□□□□□ -1.39
USH2A-203ENST00000463147 KIAA0825Q8IV33 1275 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 DDX11Q96FC9 970 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 ZDHHC15Q96MV8 337 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 TINF2Q9BSI4 451 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 C11orf84Q9BUA3 381 aaPredicted RBP6.36□□□□□ -1.39
USH2A-203ENST00000463147 NGRNQ9NPE2 291 aaKnown RBP6.36□□□□□ -1.39
USH2A-203ENST00000463147 WHRNQ9P202 907 aa6.36□□□□□ -1.39
USH2A-203ENST00000463147 PPP1R1BQ9UD71 204 aaPredicted RBP6.36□□□□□ -1.39
USH2A-203ENST00000463147 FAM86C2PA6NEL3 165 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 C9orf118A6NHY6 69 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 AURKAO14965 403 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 ACVRL1P37023 503 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 PPFIBP1Q86W92 1011 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 SH3RF3Q8TEJ3 882 aaPredicted RBP6.35□□□□□ -1.39
USH2A-203ENST00000463147 LCORQ96JN0 433 aaPredicted RBP6.35□□□□□ -1.39
USH2A-203ENST00000463147 MENTQ9BUN1 341 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 GBP3Q9H0R5 595 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 RWDD3Q9Y3V2 267 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 ZNF451Q9Y4E5 1061 aa6.35□□□□□ -1.39
USH2A-203ENST00000463147 NPHS1O60500 1241 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 TP53P04637 393 aaPredicted RBP6.34□□□□□ -1.39
USH2A-203ENST00000463147 PAMP19021 973 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 GUCY2CP25092 1073 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 CRIP3Q6Q6R5 217 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 ETV3LQ6ZN32 361 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 RBBP8NLQ8NC74 664 aaPredicted RBP6.34□□□□□ -1.39
USH2A-203ENST00000463147 UBXN4Q92575 508 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 FERD3LQ96RJ6 166 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 MTA3Q9BTC8 594 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 SSBP3Q9BWW4 388 aaPredicted RBP6.34□□□□□ -1.39
USH2A-203ENST00000463147 AP5M1Q9H0R1 490 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 ACBD3Q9H3P7 528 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 BCAS3Q9H6U6 928 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 RXFP1Q9HBX9 757 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 SLC12A7Q9Y666 1083 aa6.34□□□□□ -1.39
USH2A-203ENST00000463147 LAMTOR5O43504 91 aa6.33□□□□□ -1.4
USH2A-203ENST00000463147 UNC5AQ6ZN44 842 aa6.33□□□□□ -1.4
USH2A-203ENST00000463147 GORASP1Q9BQQ3 440 aa6.33□□□□□ -1.4
USH2A-203ENST00000463147 SEMA4AQ9H3S1 761 aa6.33□□□□□ -1.4
USH2A-203ENST00000463147 METTL5Q9NRN9 209 aaKnown RBP6.33□□□□□ -1.4
USH2A-203ENST00000463147 ZNF214Q9UL59 606 aaPredicted RBP6.33□□□□□ -1.4
USH2A-203ENST00000463147 BACE2Q9Y5Z0 518 aa6.33□□□□□ -1.4
USH2A-203ENST00000463147 C8BP07358 591 aa6.32□□□□□ -1.4
USH2A-203ENST00000463147 TXNDC5Q8NBS9 432 aaKnown RBP6.32□□□□□ -1.4
USH2A-203ENST00000463147 TGIF2Q9GZN2 237 aa6.32□□□□□ -1.4
USH2A-203ENST00000463147 SCAND2PQ9GZW5 306 aaPredicted RBP6.32□□□□□ -1.4
USH2A-203ENST00000463147 ST6GALNAC2Q9UJ37 374 aa6.32□□□□□ -1.4
USH2A-203ENST00000463147 NPHP3-ACAD11A0A0J9YXS1 232 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 C2orf71A6NGG8 1288 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 PPM1BO75688 479 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 ZNF76P36508 570 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 RACK1P63244 317 aaKnown RBP6.31□□□□□ -1.4
USH2A-203ENST00000463147 AMPD2Q01433 879 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 GRB10Q13322 594 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 PPP2R5DQ14738 602 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 SPRED1Q7Z699 444 aa6.31□□□□□ -1.4
USH2A-203ENST00000463147 PUS7Q96PZ0 661 aaKnown RBP6.31□□□□□ -1.4
USH2A-203ENST00000463147 CYP7B1O75881 506 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
USH2A-203ENST00000463147 HEATR6Q6AI08 1181 aaKnown RBP6.3□□□□□ -1.4
USH2A-203ENST00000463147 MIB1Q86YT6 1006 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 SEC14L1Q92503 715 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 KLC2Q9H0B6 622 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 VPS11Q9H270 941 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 CAPN10Q9HC96 672 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 GULP1Q9UBP9 304 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 CADPSQ9ULU8 1353 aa6.3□□□□□ -1.4
USH2A-203ENST00000463147 NPEPPSL1A6NEC2 478 aa6.29□□□□□ -1.4
USH2A-203ENST00000463147 SLPIP03973 132 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms