RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 TMEM199Q8N511 208 aa8.47□□□□□ -1.05
PTPRF-210ENST00000463041 OR6J1Q8NGC5 347 aa8.47□□□□□ -1.05
PTPRF-210ENST00000463041 TAAR1Q96RJ0 339 aa8.47□□□□□ -1.05
PTPRF-210ENST00000463041 RMDN3Q96TC7 470 aa8.47□□□□□ -1.05
PTPRF-210ENST00000463041 GPHNQ9NQX3 736 aaPredicted RBP8.47□□□□□ -1.05
PTPRF-210ENST00000463041 MTMR10Q9NXD2 777 aa8.47□□□□□ -1.05
PTPRF-210ENST00000463041 RBM8AQ9Y5S9 174 aaKnown RBP8.47□□□□□ -1.05
PTPRF-210ENST00000463041 TRIP12Q14669 1992 aaPredicted RBP8.47□□□□□ -1.05
PTPRF-210ENST00000463041 GRIN2DO15399 1336 aa8.47□□□□□ -1.05
PTPRF-210ENST00000463041 PNMA6FA0A0J9YX94 578 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 A6NJR5 290 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 EIF3JO75822 258 aaKnown RBP8.46□□□□□ -1.06
PTPRF-210ENST00000463041 CFBP00751 764 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 SUPT20HL2P0C7V6 817 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 HSD17B4P51659 736 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 PURAQ00577 322 aaKnown RBP8.46□□□□□ -1.06
PTPRF-210ENST00000463041 TROAPQ12815 778 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 PPP2R5BQ15173 497 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 TMEM67Q5HYA8 995 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 ARHGEF16Q5VV41 709 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 CCDC62Q6P9F0 684 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 CASC1Q6TDU7 716 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 STOX1Q6ZVD7 989 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 ESYT1Q9BSJ8 1104 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 MTG1Q9BT17 334 aaPredicted RBP8.46□□□□□ -1.06
PTPRF-210ENST00000463041 LSG1Q9H089 658 aaKnown RBP8.46□□□□□ -1.06
PTPRF-210ENST00000463041 STXBP5LQ9Y2K9 1186 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 PCDHA1Q9Y5I3 950 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 SCN10AQ9Y5Y9 1956 aa8.46□□□□□ -1.06
PTPRF-210ENST00000463041 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.45□□□□□ -1.06
PTPRF-210ENST00000463041 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.45□□□□□ -1.06
PTPRF-210ENST00000463041 NR3C2P08235 984 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 MYL3P08590 195 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 PTGS1P23219 599 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 MCM5P33992 734 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 LIFRP42702 1097 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 GNAQP50148 359 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 EPHB4P54760 987 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 NECTIN1Q15223 517 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 BMP2KLQ5H9B9 411 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 KCNV1Q6PIU1 500 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 Q7L0L9 218 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 MB21D2Q8IYB1 491 aaPredicted RBP8.45□□□□□ -1.06
PTPRF-210ENST00000463041 RPUSD2Q8IZ73 545 aaKnown RBP8.45□□□□□ -1.06
PTPRF-210ENST00000463041 TMEM87BQ96K49 555 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 RNPC3Q96LT9 517 aaKnown RBP8.45□□□□□ -1.06
PTPRF-210ENST00000463041 LZTS2Q9BRK4 669 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 ALDH8A1Q9H2A2 487 aaPredicted RBP8.45□□□□□ -1.06
PTPRF-210ENST00000463041 SEMA6BQ9H3T3 888 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 PXMP2Q9NR77 195 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 COL20A1Q9P218 1284 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 TAF6LQ9Y6J9 622 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 LRRC37A2A6NM11 1700 aa8.45□□□□□ -1.06
PTPRF-210ENST00000463041 KAT6AQ92794 2004 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 GCOM1H8Y6P7 765 aaPredicted RBP8.44□□□□□ -1.06
PTPRF-210ENST00000463041 OPLAHO14841 1288 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 SLC27A2O14975 620 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 PRC1O43663 620 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 CYTH3O43739 400 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 PPP1R11O60927 126 aaPredicted RBP8.44□□□□□ -1.06
PTPRF-210ENST00000463041 GH1P01241 217 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 POLR2MP0CAP2 368 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 TGFB3P10600 412 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 CSF2RAP15509 400 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 CASTP20810 708 aaKnown RBP8.44□□□□□ -1.06
PTPRF-210ENST00000463041 KIF5BP33176 963 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 CYP2C18P33260 490 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 ANTXR2P58335 489 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 PSMC6P62333 389 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 PTPN11Q06124 597 aaPredicted RBP8.44□□□□□ -1.06
PTPRF-210ENST00000463041 LAMC2Q13753 1193 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 LY6KQ17RY6 165 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 NBPF20Q3BBV1 942 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 TMEM240Q5SV17 173 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 RNF20Q5VTR2 975 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 CREB3L3Q68CJ9 461 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 NFRKBQ6P4R8 1299 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 SEPT14Q6ZU15 432 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 C16orf59Q7L2K0 433 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 VSIG10LQ86VR7 867 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 CTCFLQ8NI51 663 aaPredicted RBP8.44□□□□□ -1.06
PTPRF-210ENST00000463041 COPS5Q92905 334 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 PIGSQ96S52 555 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.44□□□□□ -1.068e-13■□□□□ 8.8
PTPRF-210ENST00000463041 TRPV6Q9H1D0 765 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 HIPK3Q9H422 1215 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 LY9Q9HBG7 655 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 SENP2Q9HC62 589 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 IL23AQ9NPF7 189 aa8.44□□□□□ -1.06
PTPRF-210ENST00000463041 DDX41Q9UJV9 622 aaKnown RBP8.44□□□□□ -1.06
PTPRF-210ENST00000463041 TMEM265A0A087WTH1 108 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 CCDC69A6NI79 296 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 B4GALT4O60513 344 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 PPFIA4O75335 1185 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 DDAH1O94760 285 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 ARIH2O95376 493 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 FGBP02675 491 aa8.43□□□□□ -1.06
PTPRF-210ENST00000463041 CALM1P0DP23 149 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms