RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 PPFIA4O75335 1185 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 KRT14P02533 472 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 RFC4P35249 363 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 MNAT1P51948 309 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 GPSM2P81274 684 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 DYMQ7RTS9 669 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 STAG2Q8N3U4 1231 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 CCDC155Q8N6L0 562 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 CNBD1Q8NA66 436 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 FAM205AQ6ZU69 1335 aa13.84□□□□□ -0.19
HDAC4-208ENST00000463007 PSMA7O14818 248 aa13.83□□□□□ -0.19
HDAC4-208ENST00000463007 PDE4DQ08499 809 aa13.83□□□□□ -0.19
HDAC4-208ENST00000463007 ICE2Q659A1 982 aa13.83□□□□□ -0.19
HDAC4-208ENST00000463007 NLRC4Q9NPP4 1024 aa13.83□□□□□ -0.19
HDAC4-208ENST00000463007 MAD2L2Q9UI95 211 aa13.83□□□□□ -0.19
HDAC4-208ENST00000463007 STX8Q9UNK0 236 aa13.83□□□□□ -0.19
HDAC4-208ENST00000463007 COL11A2P13942 1736 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 EBAG9O00559 213 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 BMP15O95972 392 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 CYLC1P35663 651 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 TRAPPC10P48553 1259 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 GRM4Q14833 912 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 CCDC70Q6NSX1 233 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 SECISBP2LQ93073 1101 aaKnown RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 ARL8AQ96BM9 186 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 HOXA10P31260 410 aaPredicted RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 DIXDC1Q155Q3 683 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 DNAAF5Q86Y56 855 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 IFIH1Q9BYX4 1025 aaKnown RBP13.83□□□□□ -0.2
HDAC4-208ENST00000463007 SH3GLB2Q9NR46 395 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 MCM9Q9NXL9 1143 aa13.83□□□□□ -0.2
HDAC4-208ENST00000463007 AGPSO00116 658 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 KRT83P78385 493 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 LETM2Q2VYF4 491 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 PPM1EQ8WY54 764 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 GAKO14976 1311 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 BACH1O14867 736 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 ATP2C2O75185 946 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 IRAK1P51617 712 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 CORO7P57737 925 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 STK4Q13043 487 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 CCNI2Q6ZMN8 369 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-208ENST00000463007 DYNLL2Q96FJ2 89 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 FAM163AQ96GL9 167 aaPredicted RBP13.82□□□□□ -0.2
HDAC4-208ENST00000463007 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
HDAC4-208ENST00000463007 CAPS2Q9BXY5 557 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 ADAMTSL1Q8N6G6 1762 aa13.82□□□□□ -0.2
HDAC4-208ENST00000463007 GPR75-ASB3A0A0A6YYF3 556 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 LGALS16A8MUM7 142 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 H7C1D1 291 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 CYTH3O43739 400 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 ERLIN2O94905 339 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 PRPF6O94906 941 aaKnown RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 HPDP32754 393 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 APBA1Q02410 837 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 CT47A1Q5JQC4 288 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 ANKRD40Q6AI12 368 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RRAGAQ7L523 313 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 EXOC1Q9NV70 894 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 FAM169AQ9Y6X4 670 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 NDUFAB1O14561 156 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 EPHB6O15197 1021 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RASA1P20936 1047 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RHBDL3P58872 404 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RASSF7Q02833 373 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 LRRC41Q15345 812 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RNF187Q5TA31 235 aaPredicted RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 WDR93Q6P2C0 686 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 DAGLBQ8NCG7 672 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 CD209Q9NNX6 404 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 SSBP05455 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 TECP42680 631 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 TFAP4Q01664 338 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 ZNF804AQ7Z570 1209 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 TSEN2Q8NCE0 465 aaKnown RBP13.81□□□□□ -0.2
HDAC4-208ENST00000463007 DISC1Q9NRI5 854 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 RMND1Q9NWS8 449 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 ANKIB1Q9P2G1 1089 aa13.81□□□□□ -0.2
HDAC4-208ENST00000463007 PALM3A6NDB9 673 aaPredicted RBP13.8□□□□□ -0.2
HDAC4-208ENST00000463007 PSMD14O00487 310 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 ZNF263O14978 683 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 GSTO1P78417 241 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 DDR1Q08345 913 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 TUBB2AQ13885 445 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 TRADDQ15628 312 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 TADA2BQ86TJ2 420 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 ADSSL1Q8N142 457 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 PNMA1Q8ND90 353 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 TUBB2BQ9BVA1 445 aa13.8□□□□□ -0.2
HDAC4-208ENST00000463007 TBC1D7Q9P0N9 293 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms