RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 PCDHA6Q9UN73 950 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 PCDHA8Q9Y5H6 950 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 AXDND1Q5T1B0 1012 aaPredicted RBP13.01□□□□□ -0.33
RBM39-223ENST00000463004 FKBP1CQ5VVH2 108 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 AIFM3Q96NN9 605 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 THAP9Q9H5L6 903 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 SYNCQ9H7C4 482 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 RASAL2Q9UJF2 1139 aa13.01□□□□□ -0.33
RBM39-223ENST00000463004 A0A0G2JLW4 131 aa13□□□□□ -0.33
RBM39-223ENST00000463004 TCRBV5S4A2TA0A5A2 114 aa13□□□□□ -0.33
RBM39-223ENST00000463004 M0QZ92 97 aa13□□□□□ -0.33
RBM39-223ENST00000463004 TNFAIP3P21580 790 aa13□□□□□ -0.33
RBM39-223ENST00000463004 SFNP31947 248 aa13□□□□□ -0.33
RBM39-223ENST00000463004 BIRC3Q13489 604 aa13□□□□□ -0.33
RBM39-223ENST00000463004 RAPGEF1Q13905 1077 aa13□□□□□ -0.33
RBM39-223ENST00000463004 PPP1R2P3Q6NXS1 205 aa13□□□□□ -0.33
RBM39-223ENST00000463004 FASTKD5Q7L8L6 764 aaKnown RBP13□□□□□ -0.33
RBM39-223ENST00000463004 DAGLBQ8NCG7 672 aa13□□□□□ -0.33
RBM39-223ENST00000463004 POLLQ9UGP5 575 aa13□□□□□ -0.33
RBM39-223ENST00000463004 NEBLO76041 1014 aa13□□□□□ -0.33
RBM39-223ENST00000463004 PSAPP07602 524 aa13□□□□□ -0.33
RBM39-223ENST00000463004 P4HA1P13674 534 aa13□□□□□ -0.33
RBM39-223ENST00000463004 TM4SF1P30408 202 aa13□□□□□ -0.33
RBM39-223ENST00000463004 KRT76Q01546 638 aa13□□□□□ -0.33
RBM39-223ENST00000463004 TRPC3Q13507 836 aa13□□□□□ -0.33
RBM39-223ENST00000463004 QRICH1Q2TAL8 776 aa13□□□□□ -0.33
RBM39-223ENST00000463004 RNF207Q6ZRF8 634 aa13□□□□□ -0.33
RBM39-223ENST00000463004 RASGRP4Q8TDF6 673 aa13□□□□□ -0.33
RBM39-223ENST00000463004 NOX5Q96PH1 765 aa13□□□□□ -0.33
RBM39-223ENST00000463004 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
RBM39-223ENST00000463004 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
RBM39-223ENST00000463004 GBP6Q6ZN66 633 aa13□□□□□ -0.33
RBM39-223ENST00000463004 MIGA2Q7L4E1 593 aa13□□□□□ -0.33
RBM39-223ENST00000463004 WRNIP1Q96S55 665 aa13□□□□□ -0.33
RBM39-223ENST00000463004 ZSWIM4Q9H7M6 989 aa13□□□□□ -0.33
RBM39-223ENST00000463004 BZW2Q9Y6E2 419 aaKnown RBP13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L15C9J2P7 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L13C9JLJ4 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L11C9JVI0 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L18D6R9N7 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L22D6RA61 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L17D6RBQ6 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L19D6RCP7 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L20D6RJB6 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 USP17L24Q0WX57 530 aa13□□□□□ -0.33
RBM39-223ENST00000463004 SFMBT2Q5VUG0 894 aa13□□□□□ -0.33
RBM39-223ENST00000463004 XRRA1Q6P2D8 792 aa13□□□□□ -0.33
RBM39-223ENST00000463004 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
RBM39-223ENST00000463004 C2orf69Q8N8R5 385 aa13□□□□□ -0.33
RBM39-223ENST00000463004 FAM167AQ96KS9 214 aa13□□□□□ -0.33
RBM39-223ENST00000463004 PSMD1Q99460 953 aa13□□□□□ -0.33
RBM39-223ENST00000463004 CNOT7Q9UIV1 285 aaKnown RBP13□□□□□ -0.33
RBM39-223ENST00000463004 MAN1B1Q9UKM7 699 aa13□□□□□ -0.33
RBM39-223ENST00000463004 MAPK8IP1Q9UQF2 711 aa13□□□□□ -0.33
RBM39-223ENST00000463004 TBC1D10BQ4KMP7 808 aaPredicted RBP12.99□□□□□ -0.33
RBM39-223ENST00000463004 CCDC122Q5T0U0 273 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 SARM1Q6SZW1 724 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 ZNF771Q7L3S4 317 aaPredicted RBP12.99□□□□□ -0.33
RBM39-223ENST00000463004 FMR1NBQ8N0W7 255 aaPredicted RBP12.99□□□□□ -0.33
RBM39-223ENST00000463004 PAGE5Q96GU1 130 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 CCSER1Q9C0I3 900 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 SEL1LQ9UBV2 794 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 KIAA0753Q2KHM9 967 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 FAM83BQ5T0W9 1011 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 LIN9Q5TKA1 542 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 FAM83AQ86UY5 434 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 SRBD1Q8N5C6 995 aaKnown RBP12.99□□□□□ -0.33
RBM39-223ENST00000463004 NSUN6Q8TEA1 469 aaKnown RBP12.99□□□□□ -0.33
RBM39-223ENST00000463004 GOLGA1Q92805 767 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 RTFDC1Q9BY42 306 aaPredicted RBP12.99□□□□□ -0.33
RBM39-223ENST00000463004 DLG5Q8TDM6 1919 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 CTNNA2P26232 953 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 CACNB3P54284 484 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 ARHGAP4P98171 946 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 UNC13DQ70J99 1090 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 PROM2Q8N271 834 aa12.99□□□□□ -0.33
RBM39-223ENST00000463004 CTNND1O60716 968 aaKnown RBP12.98□□□□□ -0.33
RBM39-223ENST00000463004 ACTN2P35609 894 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 STAMQ92783 540 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 ACCSQ96QU6 501 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 VCPKMTQ9H867 229 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 MAP3K20Q9NYL2 800 aaKnown RBP12.98□□□□□ -0.33
RBM39-223ENST00000463004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.98□□□□□ -0.33
RBM39-223ENST00000463004 SLC8A3P57103 927 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 KCNV1Q6PIU1 500 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 SYCE1Q8N0S2 351 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 ANKS1AQ92625 1134 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 FANCLQ9NW38 375 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 COPB1P53618 953 aaKnown RBP12.98□□□□□ -0.33
RBM39-223ENST00000463004 RASA3Q14644 834 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 CRY2Q49AN0 593 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 SMIM5Q71RC9 77 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 NELFCDQ8IXH7 590 aa12.98□□□□□ -0.33
RBM39-223ENST00000463004 ZNF830Q96NB3 372 aaPredicted RBP12.98□□□□□ -0.33
RBM39-223ENST00000463004 TIPINQ9BVW5 301 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms