RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 ZBED2Q9BTP6 218 aa23.86■■□□□ 1.41
PTPN18-208ENST00000462996 RANBP17Q9H2T7 1088 aaKnown RBP23.86■■□□□ 1.41
PTPN18-208ENST00000462996 INCENPQ9NQS7 918 aa23.86■■□□□ 1.41
PTPN18-208ENST00000462996 DDX19BQ9UMR2 479 aa23.86■■□□□ 1.41
PTPN18-208ENST00000462996 MTMR7Q9Y216 660 aa23.86■■□□□ 1.41
PTPN18-208ENST00000462996 PTPDC1A2A3K4 754 aa23.85■■□□□ 1.41
PTPN18-208ENST00000462996 PPARAQ07869 468 aa23.85■■□□□ 1.41
PTPN18-208ENST00000462996 PPP2R5BQ15173 497 aa23.85■■□□□ 1.41
PTPN18-208ENST00000462996 LRRFIP1Q32MZ4 808 aaKnown RBP23.85■■□□□ 1.41
PTPN18-208ENST00000462996 SLC30A10Q6XR72 485 aa23.85■■□□□ 1.41
PTPN18-208ENST00000462996 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.85■■□□□ 1.41
PTPN18-208ENST00000462996 MTUS1Q9ULD2 1270 aa23.85■■□□□ 1.41
PTPN18-208ENST00000462996 NOD1Q9Y239 953 aa23.85■■□□□ 1.41
PTPN18-208ENST00000462996 NKRFO15226 690 aaKnown RBP eCLIP23.84■■□□□ 1.41
PTPN18-208ENST00000462996 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
PTPN18-208ENST00000462996 MS4A1P11836 297 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 SLC16A2P36021 539 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 PTGISQ16647 500 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 TCTN1Q2MV58 587 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 LEXMQ3ZCV2 418 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 NACAP1Q9BZK3 213 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.84■■□□□ 1.41
PTPN18-208ENST00000462996 RAD50Q92878 1312 aa23.84■■□□□ 1.41
PTPN18-208ENST00000462996 CALML3P27482 149 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 CHMP4BP1P59074 171 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 ERVK-21P61565 698 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 PPP4R3BQ5MIZ7 849 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 AFAP1L1Q8TED9 768 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 CLEC4DQ8WXI8 215 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 NAPBQ9H115 298 aa23.83■■□□□ 1.41
PTPN18-208ENST00000462996 SIP14410 1827 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 LINC01553A4QN01 128 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 TSPY2A6NKD2 308 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 GJB5O95377 273 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 IL9P15248 144 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 KCNA5P22460 613 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 EDNRBP24530 442 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
PTPN18-208ENST00000462996 PDE4DQ08499 809 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 CCDC96Q2M329 555 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 GDF6Q6KF10 455 aaPredicted RBP23.82■■□□□ 1.4
PTPN18-208ENST00000462996 BTNL9Q6UXG8 535 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 CAGE1Q8TC20 777 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 SCFD2Q8WU76 684 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 DHX38Q92620 1227 aaKnown RBP23.82■■□□□ 1.4
PTPN18-208ENST00000462996 TGS1Q96RS0 853 aaKnown RBP23.82■■□□□ 1.4
PTPN18-208ENST00000462996 RAD9AQ99638 391 aa23.82■■□□□ 1.4
PTPN18-208ENST00000462996 ARIH2O95376 493 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 TXNP10599 105 aaKnown RBP23.81■■□□□ 1.4
PTPN18-208ENST00000462996 SELPP16109 830 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 NOVP48745 357 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 CTDSPL2Q05D32 466 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 CNKSR3Q6P9H4 555 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 CCDC155Q8N6L0 562 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 DCAF4Q8WV16 495 aa23.81■■□□□ 1.4
PTPN18-208ENST00000462996 NBNO60934 754 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 TRIOO75962 3097 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 CXCL10P02778 98 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 SSTR3P32745 418 aaPredicted RBP23.8■■□□□ 1.4
PTPN18-208ENST00000462996 MRE11P49959 708 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 SYDE2Q5VT97 1194 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 RNF207Q6ZRF8 634 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 LRRC8DQ7L1W4 858 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 UIMC1Q96RL1 719 aa23.8■■□□□ 1.4
PTPN18-208ENST00000462996 RPS6P62753 249 aaKnown RBP23.79■■□□□ 1.4
PTPN18-208ENST00000462996 PTCRAQ6ISU1 281 aaPredicted RBP23.79■■□□□ 1.4
PTPN18-208ENST00000462996 SESTD1Q86VW0 696 aa23.79■■□□□ 1.4
PTPN18-208ENST00000462996 C5orf42Q9H799 3197 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 ABHD14A-ACY1A0A1B0GW23 586 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 GRXCR2A6NFK2 248 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 FOXP2O15409 715 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 RBL2Q08999 1139 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 AFG1LQ8WV93 481 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 KAT2BQ92831 832 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 GPCPD1Q9NPB8 672 aa23.78■■□□□ 1.4
PTPN18-208ENST00000462996 CKBP12277 381 aa23.77■■□□□ 1.4
PTPN18-208ENST00000462996 ALADP13716 330 aa23.77■■□□□ 1.4
PTPN18-208ENST00000462996 FAM117BQ6P1L5 589 aa23.77■■□□□ 1.4
PTPN18-208ENST00000462996 CCDC62Q6P9F0 684 aa23.77■■□□□ 1.4
PTPN18-208ENST00000462996 DNERQ8NFT8 737 aa23.77■■□□□ 1.4
PTPN18-208ENST00000462996 GPATCH3Q96I76 525 aa23.77■■□□□ 1.4
PTPN18-208ENST00000462996 FRMPD2Q68DX3 1309 aaPredicted RBP23.77■■□□□ 1.4
PTPN18-208ENST00000462996 RANBP6O60518 1105 aaKnown RBP23.76■■□□□ 1.39
PTPN18-208ENST00000462996 PARNO95453 639 aaKnown RBP23.76■■□□□ 1.39
PTPN18-208ENST00000462996 NHLH1Q02575 133 aa23.76■■□□□ 1.39
PTPN18-208ENST00000462996 ZMYM1Q5SVZ6 1142 aa23.76■■□□□ 1.39
PTPN18-208ENST00000462996 C17orf80Q9BSJ5 609 aa23.76■■□□□ 1.39
PTPN18-208ENST00000462996 MMP3P08254 477 aa23.75■■□□□ 1.39
PTPN18-208ENST00000462996 TRAF7Q6Q0C0 670 aa23.75■■□□□ 1.39
PTPN18-208ENST00000462996 MPHOSPH6Q99547 160 aaKnown RBP23.75■■□□□ 1.39
PTPN18-208ENST00000462996 POTEB3A0JP26 581 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 IKBKEQ14164 716 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 LY6KQ17RY6 165 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 POTEBQ6S5H4 581 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 FBXO22Q8NEZ5 403 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 NEK9Q8TD19 979 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 TMEM47Q9BQJ4 181 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 GTF2IRD1Q9UHL9 959 aa23.74■■□□□ 1.39
PTPN18-208ENST00000462996 ARHGAP1Q07960 439 aa23.73■■□□□ 1.39
PTPN18-208ENST00000462996 CSPP1Q1MSJ5 1256 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms