RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 C11orf49Q9H6J7 331 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 XPNPEP3Q9NQH7 507 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 PXMP2Q9NR77 195 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 KIAA1217Q5T5P2 1943 aa13.94□□□□□ -0.18
HPS1-206ENST00000462743 MEIS2O14770 477 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 ADCY6O43306 1168 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 EIF3JO75822 258 aaKnown RBP13.93□□□□□ -0.18
HPS1-206ENST00000462743 ANKRD1Q15327 319 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 STXBP2Q15833 593 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 DUSP28Q4G0W2 176 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 ARHGEF16Q5VV41 709 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 ANO1Q5XXA6 986 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 IL27Q8NEV9 243 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 DIS3LQ8TF46 1054 aaKnown RBP13.93□□□□□ -0.18
HPS1-206ENST00000462743 PDCD2LQ9BRP1 358 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 RNF26Q9BY78 433 aaPredicted RBP13.93□□□□□ -0.18
HPS1-206ENST00000462743 PSTPIP2Q9H939 334 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 PDGFCQ9NRA1 345 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 PHF24Q9UPV7 400 aa13.93□□□□□ -0.18
HPS1-206ENST00000462743 FRMPD4Q14CM0 1322 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 hCG_1642624A0A1W2PR95 340 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 NKRFO15226 690 aaKnown RBP eCLIP13.92□□□□□ -0.18
HPS1-206ENST00000462743 CTAGE5O15320 804 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 SMPD1P17405 629 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 HOXA13P31271 388 aaPredicted RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 ADCYAP1R1P41586 468 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 RBM25P49756 843 aaKnown RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 PKN1Q16512 942 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 PFKFB3Q16875 520 aaPredicted RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 GJC2Q5T442 439 aaPredicted RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 C1orf53Q5VUE5 145 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 PPP1R18Q6NYC8 613 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 XRRA1Q6P2D8 792 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 CCDC62Q6P9F0 684 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 FBXO16Q8IX29 292 aaPredicted RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 GLT8D2Q9H1C3 349 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 SPC25Q9HBM1 224 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 BARHL2Q9NY43 387 aa13.92□□□□□ -0.18
HPS1-206ENST00000462743 NAP1L2Q9ULW6 460 aaPredicted RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 DDX49Q9Y6V7 483 aaKnown RBP13.92□□□□□ -0.18
HPS1-206ENST00000462743 LRRC37A2A6NM11 1700 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 KBTBD13C9JR72 458 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 PGK1P00558 417 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 CCT2P78371 535 aaKnown RBP13.91□□□□□ -0.18
HPS1-206ENST00000462743 PGM5Q15124 567 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 USP17L6PQ6QN14 398 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 EEPD1Q7L9B9 569 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 PCSK9Q8NBP7 692 aaKnown RBP13.91□□□□□ -0.18
HPS1-206ENST00000462743 CUL5Q93034 780 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 KIF2CQ99661 725 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 WDR11Q9BZH6 1224 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 RIC8AQ9NPQ8 531 aa13.91□□□□□ -0.18
HPS1-206ENST00000462743 SYNRGQ9UMZ2 1314 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 ALPK3Q96L96 1907 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 ESYT2A0FGR8 921 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 MOXD2PA6NHM9 499 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 STXBP3O00186 592 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 PFKFB2O60825 505 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 STAM2O75886 525 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 TGFB3P10600 412 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 SCG2P13521 617 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
HPS1-206ENST00000462743 TTLL4Q14679 1199 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 SNX17Q15036 470 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 TYW1BQ6NUM6 668 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 FCHSD1Q86WN1 690 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 FAM177A1Q8N128 213 aaPredicted RBP13.9□□□□□ -0.18
HPS1-206ENST00000462743 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 AP5M1Q9H0R1 490 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 GTF3C3Q9Y5Q9 886 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 MYH7BA7E2Y1 1941 aa13.9□□□□□ -0.18
HPS1-206ENST00000462743 DYNC1LI2O43237 492 aaPredicted RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 RGS20O76081 388 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 FOSP01100 380 aaPredicted RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 CCND2P30279 289 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 NEK4P51957 841 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 AK2P54819 239 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 KCNA10Q16322 511 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 TMEM63BQ5T3F8 832 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 KCNV1Q6PIU1 500 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 CPLX2Q6PUV4 134 aaKnown RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 SLC39A5Q6ZMH5 540 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 HEATR3Q7Z4Q2 680 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
HPS1-206ENST00000462743 LENG1Q96BZ8 264 aaPredicted RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 C22orf23Q9BZE7 217 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 SENP6Q9GZR1 1112 aaPredicted RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 ZMYND12Q9H0C1 365 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 NCOA5Q9HCD5 579 aaKnown RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 SH3GLB2Q9NR46 395 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 DDX41Q9UJV9 622 aaKnown RBP13.89□□□□□ -0.19
HPS1-206ENST00000462743 TPCN1Q9ULQ1 816 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 ELP1O95163 1332 aa13.89□□□□□ -0.19
HPS1-206ENST00000462743 MYADML2A6NDP7 307 aa13.88□□□□□ -0.19
HPS1-206ENST00000462743 SMCO2A6NFE2 343 aa13.88□□□□□ -0.19
HPS1-206ENST00000462743 A6NJR5 290 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms