RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 HPS3Q969F9 1004 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 GTPBP3Q969Y2 492 aaKnown RBP3.85□□□□□ -1.79
SMC4-203ENST00000462668 KCNK4Q9NYG8 393 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 SIGLEC6O43699 453 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 DEAF1O75398 565 aaPredicted RBP3.85□□□□□ -1.79
SMC4-203ENST00000462668 SRFP11831 508 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 HALP42357 657 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 ARL4DP49703 201 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 PICALMQ13492 652 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 ALFQ53S48 1182 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 COBLL1Q53SF7 1204 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.85□□□□□ -1.79
SMC4-203ENST00000462668 STK11IPQ8N1F8 1099 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 DIO2Q92813 273 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 ISL2Q96A47 359 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 SGCZQ96LD1 299 aa3.85□□□□□ -1.79
SMC4-203ENST00000462668 TMEFF2Q9UIK5 374 aaPredicted RBP3.85□□□□□ -1.79
SMC4-203ENST00000462668 PRAMEF27A3QJZ7 478 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 PRAMEF13Q5VWM6 474 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 KRBA2Q6ZNG9 492 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 CCDC144CPQ8IYA2 1237 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 NXPE1Q8N323 547 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 SLC5A5Q92911 643 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 LGR6Q9HBX8 967 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 DLL1O00548 723 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 AURKAO14965 403 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 TP53P04637 393 aaPredicted RBP3.84□□□□□ -1.79
SMC4-203ENST00000462668 VSIG8P0DPA2 414 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 PSAPL1Q6NUJ1 521 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 TXNDC11Q6PKC3 985 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 COX4I2Q96KJ9 171 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 MTA3Q9BTC8 594 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 ISCA1Q9BUE6 129 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 USP26Q9BXU7 913 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 INO80BQ9C086 356 aaPredicted RBP3.84□□□□□ -1.79
SMC4-203ENST00000462668 ATXN3LQ9H3M9 355 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 DGKBQ9Y6T7 804 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 WDR64B1ANS9 1081 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 TPP1O14773 563 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 SLFN14P0C7P3 912 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 OCRLQ01968 901 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 SNX17Q15036 470 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 TUBB8Q3ZCM7 444 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 HHIPL2Q6UWX4 724 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 AHCYL2Q96HN2 611 aaKnown RBP3.84□□□□□ -1.79
SMC4-203ENST00000462668 ZDHHC5Q9C0B5 715 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 PRDM14Q9GZV8 571 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 NMRK2Q9NPI5 230 aa3.84□□□□□ -1.79
SMC4-203ENST00000462668 GBP1P32455 592 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 CTSKP43235 329 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 MAP2K3P46734 347 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 IRX6P78412 446 aaPredicted RBP3.84□□□□□ -1.8
SMC4-203ENST00000462668 ARHGAP44Q17R89 818 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 PRSS53Q2L4Q9 553 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 EZH1Q92800 747 aaPredicted RBP3.84□□□□□ -1.8
SMC4-203ENST00000462668 PGBD4Q96DM1 585 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 ACSBG1Q96GR2 724 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.84□□□□□ -1.8
SMC4-203ENST00000462668 TRAF6Q9Y4K3 522 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 SPO11Q9Y5K1 396 aa3.84□□□□□ -1.8
SMC4-203ENST00000462668 FRMPD2Q68DX3 1309 aaPredicted RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 PMM2O15305 246 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 MSCO60682 206 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 SNUPNO95149 360 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 EPXP11678 715 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 HSPA6P17066 643 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 XRRA1Q6P2D8 792 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 ENOX1Q8TC92 643 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 TEKT5Q96M29 485 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 TBATAQ96M53 351 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 SMAD5Q99717 465 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 WDR12Q9GZL7 423 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 SMOC1Q9H4F8 434 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 PCDHA9Q9Y5H5 950 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 POU2F2P09086 479 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 ADH5P11766 374 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 PDE6BP35913 854 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 AK2P54819 239 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 PPP4R4Q6NUP7 873 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 SLC4A10Q6U841 1118 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 RIPOR1Q6ZS17 1223 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 PHACTR4Q8IZ21 702 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 DEPTORQ8TB45 409 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 BRF1Q92994 677 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 TRIM47Q96LD4 638 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 FNIP2Q9P278 1114 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 L1RE1Q9UN81 338 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 SF3B6Q9Y3B4 125 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 DAAM1Q9Y4D1 1078 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 NOP56O00567 594 aaKnown RBP3.83□□□□□ -1.8
SMC4-203ENST00000462668 FRS3O43559 492 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 PPFIA3O75145 1194 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 THBDP07204 575 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 MYL3P08590 195 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 MZT2AQ6P582 158 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 TLDC1Q6P9B6 456 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 KIAA1211Q6ZU35 1233 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 NOSTRINQ8IVI9 506 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 FIBCD1Q8N539 461 aa3.83□□□□□ -1.8
SMC4-203ENST00000462668 IGSF22Q8N9C0 903 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms