RNA–Protein interactions for RNA: ENST00000462488.1

PGBD2-203, Transcript of piggyBac transposable element derived 2, humanhuman

TSL 5

Gene PGBD2, Length 282 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-203ENST00000462488 CYP46A1Q9Y6A2 500 aa9.64□□□□□ -0.87
PGBD2-203ENST00000462488 TNRC18O15417 2968 aaPredicted RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 MOXD2PA6NHM9 499 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 PQBP1O60828 265 aaKnown RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 PPP1R11O60927 126 aaPredicted RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 TXNP10599 105 aaKnown RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 SMPD1P17405 629 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 RPS6KB1P23443 525 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 MNX1P50219 401 aaPredicted RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 ACLYP53396 1101 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 RTP1P59025 263 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 EXOSC10Q01780 885 aaKnown RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 TTLL4Q14679 1199 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 PWP2Q15269 919 aaKnown RBP9.63□□□□□ -0.87
PGBD2-203ENST00000462488 SCFD2Q8WU76 684 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 USP26Q9BXU7 913 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 MAF1Q9H063 256 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 BRPF3Q9ULD4 1205 aa9.63□□□□□ -0.87
PGBD2-203ENST00000462488 MKI67P46013 3256 aaKnown RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 ASTN1O14525 1302 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 A0A1W2PQ45 241 aaPredicted RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 A0A1W2PQY0 241 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 MYADML2A6NDP7 307 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 DCDC2CA8MYV0 355 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 ADAMTS4O75173 837 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 ASGR1P07306 291 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 NR3C2P08235 984 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 MYL3P08590 195 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 COL6A1P12109 1028 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 CCND2P30279 289 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 NAPAP54920 295 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 GJA9P57773 515 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 CCT2P78371 535 aaKnown RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 IRX5P78411 483 aaPredicted RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 FSCN1Q16658 493 aaKnown RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 TRIM60Q495X7 471 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 TAPT1Q6NXT6 567 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 TMTC3Q6ZXV5 915 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 SGMS1Q86VZ5 419 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 MTMR8Q96EF0 704 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 IWS1Q96ST2 819 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 TSEN34Q9BSV6 310 aaKnown RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 PSTPIP2Q9H939 334 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 PXMP2Q9NR77 195 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 MAP3K20Q9NYL2 800 aaKnown RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 PHF24Q9UPV7 400 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 MRVI1Q9Y6F6 885 aa9.62□□□□□ -0.87
PGBD2-203ENST00000462488 V9GY48 417 aaPredicted RBP9.62□□□□□ -0.87
PGBD2-203ENST00000462488 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 CPLX1O14810 134 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 ADCY6O43306 1168 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 EPB41L2O43491 1005 aaKnown RBP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 SORBS3O60504 671 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 EIF3JO75822 258 aaKnown RBP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 PTGS1P23219 599 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 CPT1AP50416 773 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 HSD17B4P51659 736 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 SLC35G1Q2M3R5 365 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 DUSP28Q4G0W2 176 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 CXCL17Q6UXB2 119 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 RUFY3Q7L099 469 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 SAMD3Q8N6K7 520 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 KLHDC9Q8NEP7 349 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 MORC4Q8TE76 937 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 GPKOWQ92917 476 aaPredicted RBP eCLIP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 ZFP91Q96JP5 570 aaPredicted RBP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 UPF3BQ9BZI7 483 aaKnown RBP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 KATNBL1Q9H079 304 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 EHMT1Q9H9B1 1298 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 PDRG1Q9NUG6 133 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 COL20A1Q9P218 1284 aa9.61□□□□□ -0.87
PGBD2-203ENST00000462488 COLQQ9Y215 455 aaPredicted RBP9.61□□□□□ -0.87
PGBD2-203ENST00000462488 LCTP09848 1927 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 ALPK3Q96L96 1907 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 A0A0U1RQG5 324 aaPredicted RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 NKRFO15226 690 aaKnown RBP eCLIP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 GH1P01241 217 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 ADD1P35611 737 aaKnown RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 MDM2Q00987 491 aaPredicted RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 TLE2Q04725 743 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 STK3Q13188 491 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 MKRN4PQ13434 485 aaPredicted RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 LY6KQ17RY6 165 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 FAM47CQ5HY64 1035 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 TMEM63BQ5T3F8 832 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 CPLX2Q6PUV4 134 aaKnown RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 USP17L6PQ6QN14 398 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 COPS5Q92905 334 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 KCNB2Q92953 911 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 LARP6Q9BRS8 491 aaKnown RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 UBE2OQ9C0C9 1292 aaKnown RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 UPF3AQ9H1J1 476 aaKnown RBP9.6□□□□□ -0.87
PGBD2-203ENST00000462488 TMEM39AQ9NV64 488 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 POLR3EQ9NVU0 708 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 RTEL1Q9NZ71 1219 aa9.6□□□□□ -0.87
PGBD2-203ENST00000462488 GNEQ9Y223 722 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms