RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 ZSCAN10Q96SZ4 725 aaPredicted RBP17.99■□□□□ 0.47
SKA3-204ENST00000462482 UBAC1Q9BSL1 405 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 KRT23Q9C075 422 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 WNT8AQ9H1J5 351 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 NKX2-4Q9H2Z4 354 aa17.99■□□□□ 0.47
SKA3-204ENST00000462482 TRMT13Q9NUP7 481 aaKnown RBP17.99■□□□□ 0.47
SKA3-204ENST00000462482 A6NJR5 290 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 CYP2C9P11712 490 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 IGFBP4P22692 258 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 CHMP4BP1P59074 171 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 PTPN11Q06124 597 aaPredicted RBP17.98■□□□□ 0.47
SKA3-204ENST00000462482 BFSP2Q13515 415 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 NBPF20Q3BBV1 942 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 TJAP1Q5JTD0 557 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 NFRKBQ6P4R8 1299 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 NSUN6Q8TEA1 469 aaKnown RBP17.98■□□□□ 0.47
SKA3-204ENST00000462482 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
SKA3-204ENST00000462482 DSCC1Q9BVC3 393 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 CNNM2Q9H8M5 875 aa17.98■□□□□ 0.47
SKA3-204ENST00000462482 MRPL11Q9Y3B7 192 aaKnown RBP17.98■□□□□ 0.47
SKA3-204ENST00000462482 B4E1Z4 1266 aa17.97■□□□□ 0.47
SKA3-204ENST00000462482 PARP1P09874 1014 aaKnown RBP17.97■□□□□ 0.47
SKA3-204ENST00000462482 ATP2A2P16615 1042 aaKnown RBP17.97■□□□□ 0.47
SKA3-204ENST00000462482 RFC2P35250 354 aa17.97■□□□□ 0.47
SKA3-204ENST00000462482 DEFB128Q7Z7B8 93 aa17.97■□□□□ 0.47
SKA3-204ENST00000462482 ADGRF4Q8IZF3 695 aa17.97■□□□□ 0.47
SKA3-204ENST00000462482 CCDC155Q8N6L0 562 aa17.97■□□□□ 0.47
SKA3-204ENST00000462482 A0A0C4DFX4 3053 aa17.97■□□□□ 0.47
SKA3-204ENST00000462482 GH1P01241 217 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 STXBP2Q15833 593 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 PPP2R2DQ66LE6 453 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 SEPT14Q6ZU15 432 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 FBXO11Q86XK2 927 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 IL27Q8NEV9 243 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 ANKS1AQ92625 1134 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 IWS1Q96ST2 819 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 FTOQ9C0B1 505 aaKnown RBP eCLIP17.96■□□□□ 0.47
SKA3-204ENST00000462482 TSPYL2Q9H2G4 693 aaPredicted RBP17.96■□□□□ 0.47
SKA3-204ENST00000462482 CPVLQ9H3G5 476 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 VAT1LQ9HCJ6 419 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 PCDHA11Q9Y5I1 949 aa17.96■□□□□ 0.47
SKA3-204ENST00000462482 IFIT1BQ5T764 474 aaKnown RBP17.95■□□□□ 0.46
SKA3-204ENST00000462482 ARHGEF16Q5VV41 709 aa17.95■□□□□ 0.46
SKA3-204ENST00000462482 USP38Q8NB14 1042 aa17.95■□□□□ 0.46
SKA3-204ENST00000462482 SYTL5Q8TDW5 730 aaPredicted RBP17.95■□□□□ 0.46
SKA3-204ENST00000462482 COPS5Q92905 334 aa17.95■□□□□ 0.46
SKA3-204ENST00000462482 RMDN3Q96TC7 470 aa17.95■□□□□ 0.46
SKA3-204ENST00000462482 YBX2Q9Y2T7 364 aaKnown RBP17.95■□□□□ 0.46
SKA3-204ENST00000462482 PITPNM1O00562 1244 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 IGHDP01880 384 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
SKA3-204ENST00000462482 RABGGTBP53611 331 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 TRDNQ13061 729 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 QRICH1Q2TAL8 776 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 CHST3Q7LGC8 479 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 ENAHQ8N8S7 591 aaPredicted RBP17.94■□□□□ 0.46
SKA3-204ENST00000462482 TAAR1Q96RJ0 339 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 ZSWIM5Q9P217 1185 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 THEGQ9P2T0 379 aa17.94■□□□□ 0.46
SKA3-204ENST00000462482 KIF28PB7ZC32 967 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 TRAF1Q13077 416 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 CCDC85BQ15834 202 aaPredicted RBP17.93■□□□□ 0.46
SKA3-204ENST00000462482 TMEM67Q5HYA8 995 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 AFG1LQ8WV93 481 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 ATXN2LQ8WWM7 1075 aaKnown RBP17.93■□□□□ 0.46
SKA3-204ENST00000462482 SLC9A7Q96T83 725 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 AMNQ9BXJ7 453 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 MCM3APO60318 1980 aa17.93■□□□□ 0.46
SKA3-204ENST00000462482 LRRC37A2A6NM11 1700 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 CFBP00751 764 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 IQCF3P0C7M6 154 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 PTGISQ16647 500 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 DGKDQ16760 1214 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 LY6KQ17RY6 165 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 CCDC62Q6P9F0 684 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 EXOC6Q8TAG9 804 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 PHOSPHO2Q8TCD6 241 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 TBC1D5Q92609 795 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 JMJD4Q9H9V9 463 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 MRVI1Q9Y6F6 885 aa17.92■□□□□ 0.46
SKA3-204ENST00000462482 GTPBP6O43824 516 aaPredicted RBP17.91■□□□□ 0.46
SKA3-204ENST00000462482 EIF3JO75822 258 aaKnown RBP17.91■□□□□ 0.46
SKA3-204ENST00000462482 ARIH2O95376 493 aa17.91■□□□□ 0.46
SKA3-204ENST00000462482 MMP3P08254 477 aa17.91■□□□□ 0.46
SKA3-204ENST00000462482 EIF2AK2P19525 551 aaKnown RBP17.91■□□□□ 0.46
SKA3-204ENST00000462482 ADGRE1Q14246 886 aa17.91■□□□□ 0.46
SKA3-204ENST00000462482 CAGE1Q8TC20 777 aa17.91■□□□□ 0.46
SKA3-204ENST00000462482 KATNAL1Q9BW62 490 aa17.91■□□□□ 0.46
SKA3-204ENST00000462482 LAMA2P24043 3122 aaKnown RBP17.9■□□□□ 0.46
SKA3-204ENST00000462482 ERICH2A1L162 156 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 NR3C2P08235 984 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 KCNJ6P48051 423 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 MRPS5P82675 430 aaKnown RBP17.9■□□□□ 0.46
SKA3-204ENST00000462482 ARHGAP1Q07960 439 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 LAMC2Q13753 1193 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 DHX37Q8IY37 1157 aaKnown RBP17.9■□□□□ 0.46
SKA3-204ENST00000462482 MICALL1Q8N3F8 863 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 C7orf31Q8N865 590 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 AFAP1L1Q8TED9 768 aa17.9■□□□□ 0.46
SKA3-204ENST00000462482 PPP1R13LQ8WUF5 828 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms