RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 NECTIN1Q15223 517 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 DUSP28Q4G0W2 176 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 FAM47CQ5HY64 1035 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 HEATR3Q7Z4Q2 680 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 FCHSD1Q86WN1 690 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 STAG2Q8N3U4 1231 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 CCDC155Q8N6L0 562 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 CLEC4DQ8WXI8 215 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 LENG1Q96BZ8 264 aaPredicted RBP10.32□□□□□ -0.76
DDX39B-216ENST00000462421 MYL10Q9BUA6 226 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 KATNAL1Q9BW62 490 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 SPZ1Q9BXG8 430 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 LY9Q9HBG7 655 aa10.32□□□□□ -0.76
DDX39B-216ENST00000462421 KLF18A0A0U1RQI7 1052 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 hCG_1984214I3L0E3 225 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 NOP56O00567 594 aaKnown RBP10.31□□□□□ -0.76
DDX39B-216ENST00000462421 CPLX1O14810 134 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 ADAMTS4O75173 837 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 STAM2O75886 525 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 GH1P01241 217 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 MAGEA10P43363 369 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-216ENST00000462421 METAP2P50579 478 aaKnown RBP eCLIP10.31□□□□□ -0.76
DDX39B-216ENST00000462421 TROAPQ12815 778 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 C1orf53Q5VUE5 145 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 STOX1Q6ZVD7 989 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 NLRX1Q86UT6 975 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 TDHQ8IZJ6 230 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 TMEM199Q8N511 208 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 ZNF713Q8N859 430 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-216ENST00000462421 FANCBQ8NB91 859 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 SYTL5Q8TDW5 730 aaPredicted RBP10.31□□□□□ -0.76
DDX39B-216ENST00000462421 IGDCC4Q8TDY8 1250 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 LRRC2Q9BYS8 371 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 UPF3AQ9H1J1 476 aaKnown RBP10.31□□□□□ -0.76
DDX39B-216ENST00000462421 RIOX1Q9H6W3 641 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 CYP46A1Q9Y6A2 500 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 PDE4DIPQ5VU43 2346 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 RLFQ13129 1914 aa10.31□□□□□ -0.76
DDX39B-216ENST00000462421 ARVCFO00192 962 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 IGHA2P01877 340 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 NR3C2P08235 984 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 SMPD1P17405 629 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 CASTP20810 708 aaKnown RBP10.3□□□□□ -0.76
DDX39B-216ENST00000462421 RCAN1P53805 252 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 NAPAP54920 295 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 BEX3Q00994 111 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 TLE2Q04725 743 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 DGKDQ16760 1214 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 DHX37Q8IY37 1157 aaKnown RBP10.3□□□□□ -0.76
DDX39B-216ENST00000462421 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 CCDC82Q8N4S0 544 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 MORC4Q8TE76 937 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 CDHR1Q96JP9 859 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 TOX2Q96NM4 488 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 TAAR1Q96RJ0 339 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 MTG1Q9BT17 334 aaPredicted RBP10.3□□□□□ -0.76
DDX39B-216ENST00000462421 PSTPIP2Q9H939 334 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 MLXIPQ9HAP2 919 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 PXMP2Q9NR77 195 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 CENPFP49454 3210 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 PARP14Q460N5 1801 aa10.3□□□□□ -0.76
DDX39B-216ENST00000462421 DOCK3Q8IZD9 2030 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-216ENST00000462421 RXRAP19793 462 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 HOXA13P31271 388 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-216ENST00000462421 BMP8BP34820 402 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 MNX1P50219 401 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-216ENST00000462421 HSD17B4P51659 736 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 ADCY7P51828 1080 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 ANTXR2P58335 489 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 FPGSQ05932 587 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 PPIGQ13427 754 aaKnown RBP eCLIP10.29□□□□□ -0.764e-12■□□□□ 9.6
DDX39B-216ENST00000462421 ITGA7Q13683 1181 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 PPP1R18Q6NYC8 613 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 XRRA1Q6P2D8 792 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 CXCL17Q6UXB2 119 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 SGMS1Q86VZ5 419 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 SKAP1Q86WV1 359 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 RETREG2Q8NC44 543 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 GIMAP8Q8ND71 665 aaPredicted RBP10.29□□□□□ -0.76
DDX39B-216ENST00000462421 KLHDC9Q8NEP7 349 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 FGD4Q96M96 766 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 PURBQ96QR8 312 aaKnown RBP10.29□□□□□ -0.76
DDX39B-216ENST00000462421 PDGFCQ9NRA1 345 aa10.29□□□□□ -0.76
DDX39B-216ENST00000462421 XBP1P17861 261 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 EDNRBP24530 442 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 HSPA4P34932 840 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 ZNF76P36508 570 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 NEDD9Q14511 834 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 SNX17Q15036 470 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 TSGA10IPQ3SY00 556 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 MCTP2Q6DN12 878 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 TAPT1Q6NXT6 567 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 APOA5Q6Q788 366 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 Q6ZUG5 572 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 TMTC3Q6ZXV5 915 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 ANKRD33Q7Z3H0 272 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 RAB11FIP4Q86YS3 637 aa10.28□□□□□ -0.76
DDX39B-216ENST00000462421 TEX2Q8IWB9 1127 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms