RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 ANAPC4Q9UJX5 808 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 RAD50Q92878 1312 aa12.82□□□□□ -0.36
CBX3-205ENST00000462165 PTPDC1A2A3K4 754 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 A6NJR5 290 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 BAIAP3O94812 1187 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 EDNRBP24530 442 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 SLC16A2P36021 539 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 BFSP2Q13515 415 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 PPP2R5BQ15173 497 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 C20orf194Q5TEA3 1177 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 TTBK2Q6IQ55 1244 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 PI4K2BQ8TCG2 481 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 ARNTL2Q8WYA1 636 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 HLA-CQ95604 372 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 LRFN3Q9BTN0 628 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 FTOQ9C0B1 505 aaKnown RBP eCLIP12.81□□□□□ -0.36
CBX3-205ENST00000462165 MTMR7Q9Y216 660 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 SSUH2Q9Y2M2 353 aa12.81□□□□□ -0.36
CBX3-205ENST00000462165 KIAA1217Q5T5P2 1943 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 RANBP6O60518 1105 aaKnown RBP12.8□□□□□ -0.36
CBX3-205ENST00000462165 LPXNO60711 386 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 FGRP09769 529 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 GRB10Q13322 594 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 SLC30A10Q6XR72 485 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 MIER1Q8N108 512 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 DNERQ8NFT8 737 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 SCFD2Q8WU76 684 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 CLEC4DQ8WXI8 215 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 MPHOSPH6Q99547 160 aaKnown RBP12.8□□□□□ -0.36
CBX3-205ENST00000462165 RCAN3Q9UKA8 241 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 PNMA2Q9UL42 364 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 SIP14410 1827 aa12.8□□□□□ -0.36
CBX3-205ENST00000462165 ORC4O43929 436 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 CALML3P27482 149 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 RPS6P62753 249 aaKnown RBP12.79□□□□□ -0.36
CBX3-205ENST00000462165 PDE4DQ08499 809 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 TMEM31Q5JXX7 168 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
CBX3-205ENST00000462165 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 AFAP1L1Q8TED9 768 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 PPP1R13LQ8WUF5 828 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 COPS5Q92905 334 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 LMCD1Q9NZU5 365 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 NOD1Q9Y239 953 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 HCN4Q9Y3Q4 1203 aa12.79□□□□□ -0.36
CBX3-205ENST00000462165 TXNP10599 105 aaKnown RBP12.78□□□□□ -0.36
CBX3-205ENST00000462165 PDHBP11177 359 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
CBX3-205ENST00000462165 KCNJ6P48051 423 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 GPNMBQ14956 572 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 SPRED2Q7Z698 418 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 SESTD1Q86VW0 696 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 CCDC155Q8N6L0 562 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 TMEM47Q9BQJ4 181 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 TCP11L1Q9NUJ3 509 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 FRMPD2Q68DX3 1309 aaPredicted RBP12.78□□□□□ -0.36
CBX3-205ENST00000462165 WDR19Q8NEZ3 1342 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
CBX3-205ENST00000462165 B4DLN1 442 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 GPR37L1O60883 481 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 ARIH2O95376 493 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 PARNO95453 639 aaKnown RBP12.77□□□□□ -0.37
CBX3-205ENST00000462165 MRPL12P52815 198 aaKnown RBP12.77□□□□□ -0.37
CBX3-205ENST00000462165 WDR5P61964 334 aaKnown RBP12.77□□□□□ -0.37
CBX3-205ENST00000462165 RBL2Q08999 1139 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 ALX1Q15699 326 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 PTGISQ16647 500 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 VPS53Q5VIR6 699 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 KHSRPQ92945 711 aaKnown RBP eCLIP12.77□□□□□ -0.37
CBX3-205ENST00000462165 CTAGE1Q96RT6 745 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 MYH6P13533 1939 aa12.77□□□□□ -0.37
CBX3-205ENST00000462165 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 LCHNA4D1U4 455 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 CXCL10P02778 98 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 SNHG28P0DPA3 235 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 ZNF543Q08ER8 600 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 GDF6Q6KF10 455 aaPredicted RBP12.76□□□□□ -0.37
CBX3-205ENST00000462165 CCDC62Q6P9F0 684 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 CNKSR3Q6P9H4 555 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 RGS22Q8NE09 1264 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 OTUD7AQ8TE49 926 aaPredicted RBP12.76□□□□□ -0.37
CBX3-205ENST00000462165 C11orf16Q9NQ32 467 aa12.76□□□□□ -0.37
CBX3-205ENST00000462165 PI4K2BG5E9Z4 385 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 MMP3P08254 477 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 SELPP16109 830 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 MX1P20591 662 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 ERVK-21P61565 698 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
CBX3-205ENST00000462165 LRRC8DQ7L1W4 858 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 GDPD5Q8WTR4 605 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 AFG1LQ8WV93 481 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 DHX38Q92620 1227 aaKnown RBP12.75□□□□□ -0.37
CBX3-205ENST00000462165 KAT2BQ92831 832 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 TTC14Q96N46 770 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms