RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 RTN1Q16799 776 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 LRRC26Q2I0M4 334 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 TMEM63BQ5T3F8 832 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 CCDC62Q6P9F0 684 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 SLC39A5Q6ZMH5 540 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 RAB11FIP4Q86YS3 637 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 DPF3Q92784 378 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 RMDN3Q96TC7 470 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 PDCD2LQ9BRP1 358 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 PRO3102Q9H379 93 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 PXMP2Q9NR77 195 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 CNTNAP5Q8WYK1 1306 aa11.75□□□□□ -0.53
SPTAN1-204ENST00000461855 H0YGN5 161 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 EVI5O60447 810 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 RGS20O76081 388 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 SEC24BO95487 1268 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 NR3C2P08235 984 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 PDIA3P30101 505 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 ADD1P35611 737 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 ACLYP53396 1101 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 PDE4DQ08499 809 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 STXBP2Q15833 593 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 NTRK3Q16288 839 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 KCNA10Q16322 511 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 EEPD1Q7L9B9 569 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 PCSK9Q8NBP7 692 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 SCFD2Q8WU76 684 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 WDR11Q9BZH6 1224 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 SEC63Q9UGP8 760 aaKnown RBP11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 MYH6P13533 1939 aa11.74□□□□□ -0.53
SPTAN1-204ENST00000461855 CCDC196A0A1B0GTZ2 297 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 GOLGA8AA7E2F4 631 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 GOLGA8BA8MQT2 603 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 hCG_1984214I3L0E3 225 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 NKRFO15226 690 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 ELP1O95163 1332 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 HOXA13P31271 388 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 METAP2P50579 478 aaKnown RBP eCLIP11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 PGM5Q15124 567 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 C8orf34Q49A92 452 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 ARHGEF16Q5VV41 709 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 TLK2Q86UE8 772 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 ZNF713Q8N859 430 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 ZNF274Q96GC6 653 aaPredicted RBP11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 SPC25Q9HBM1 224 aa11.73□□□□□ -0.53
SPTAN1-204ENST00000461855 A0A1W2PQ45 241 aaPredicted RBP11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 A0A1W2PQY0 241 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 DYNC1LI2O43237 492 aaPredicted RBP11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 ARIH2O95376 493 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 ASGR1P07306 291 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 C6orf222P0C671 652 aaPredicted RBP11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 EIF2AK2P19525 551 aaKnown RBP11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 PTGS1P23219 599 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 CDK7P50613 346 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 PKN1Q16512 942 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 GNASQ5JWF2 1037 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 WWC2Q6AWC2 1192 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 CCDC82Q8N4S0 544 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 SLC43A3Q8NBI5 491 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 PIBF1Q8WXW3 757 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 TOX2Q96NM4 488 aa11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 V9GY48 417 aaPredicted RBP11.72□□□□□ -0.53
SPTAN1-204ENST00000461855 CEP290O15078 2479 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 hCG_1642624A0A1W2PR95 340 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 A6NJR5 290 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 STAM2O75886 525 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 CABYRO75952 493 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 TGFB3P10600 412 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 IFNAR1P17181 557 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 ICAM3P32942 547 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 RTP1P59025 263 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 MRPS9P82933 396 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 FGD1P98174 961 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 TTLL4Q14679 1199 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 FSCN1Q16658 493 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 PFKFB3Q16875 520 aaPredicted RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 PPP1R18Q6NYC8 613 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 XRRA1Q6P2D8 792 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 USP17L6PQ6QN14 398 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 ANKRD33Q7Z3H0 272 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 IL31RAQ8NI17 732 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 FERMT2Q96AC1 680 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 INPP4AQ96PE3 977 aaPredicted RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 UPF3BQ9BZI7 483 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 PSTPIP2Q9H939 334 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.53
SPTAN1-204ENST00000461855 GRIN2DO15399 1336 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms