RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 CASTP20810 708 aaKnown RBP16.02■□□□□ 0.16
RBM39-222ENST00000461849 ITGB8P26012 769 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 CPT1AP50416 773 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 CDK7P50613 346 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 EXOSC10Q01780 885 aaKnown RBP16.02■□□□□ 0.16
RBM39-222ENST00000461849 FPGSQ05932 587 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 SHHQ15465 462 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 CHST3Q7LGC8 479 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 STAG2Q8N3U4 1231 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 NSUN6Q8TEA1 469 aaKnown RBP16.02■□□□□ 0.16
RBM39-222ENST00000461849 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 TMEM87BQ96K49 555 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 KIF2CQ99661 725 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 SEZ6LQ9BYH1 1024 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 GPHNQ9NQX3 736 aaPredicted RBP16.02■□□□□ 0.16
RBM39-222ENST00000461849 MAD2L2Q9UI95 211 aa16.02■□□□□ 0.16
RBM39-222ENST00000461849 PRC1O43663 620 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 TIMP1P01033 207 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 RPS6KB1P23443 525 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 ANTXR2P58335 489 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 TRAF1Q13077 416 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 ITGA7Q13683 1181 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 TTLL4Q14679 1199 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 TMEM67Q5HYA8 995 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 ARHGEF16Q5VV41 709 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 RUFY3Q7L099 469 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 CATIPQ7Z7H3 387 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 HOMER1Q86YM7 354 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 FBXL16Q8N461 479 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 POLR3EQ9NVU0 708 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 CYP46A1Q9Y6A2 500 aa16.01■□□□□ 0.15
RBM39-222ENST00000461849 MYH6P13533 1939 aa16■□□□□ 0.15
RBM39-222ENST00000461849 RBM47A0AV96 593 aaKnown RBP16■□□□□ 0.15
RBM39-222ENST00000461849 PALM3A6NDB9 673 aaPredicted RBP16■□□□□ 0.15
RBM39-222ENST00000461849 ZBTB5O15062 677 aa16■□□□□ 0.15
RBM39-222ENST00000461849 CFBP00751 764 aa16■□□□□ 0.15
RBM39-222ENST00000461849 TXNP10599 105 aaKnown RBP16■□□□□ 0.15
RBM39-222ENST00000461849 PTGS1P23219 599 aa16■□□□□ 0.15
RBM39-222ENST00000461849 EDNRBP24530 442 aa16■□□□□ 0.15
RBM39-222ENST00000461849 GRM4Q14833 912 aa16■□□□□ 0.15
RBM39-222ENST00000461849 FAM126BQ8IXS8 530 aa16■□□□□ 0.15
RBM39-222ENST00000461849 SYTL5Q8TDW5 730 aaPredicted RBP16■□□□□ 0.15
RBM39-222ENST00000461849 TBC1D5Q92609 795 aa16■□□□□ 0.15
RBM39-222ENST00000461849 RNPC3Q96LT9 517 aaKnown RBP16■□□□□ 0.15
RBM39-222ENST00000461849 TAAR1Q96RJ0 339 aa16■□□□□ 0.15
RBM39-222ENST00000461849 RMDN3Q96TC7 470 aa16■□□□□ 0.15
RBM39-222ENST00000461849 ALDH8A1Q9H2A2 487 aaPredicted RBP16■□□□□ 0.15
RBM39-222ENST00000461849 MYL3P08590 195 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 RABEP1Q15276 862 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 STXBP2Q15833 593 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 MFSD5Q6N075 450 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 Q7L0L9 218 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 TMTC2Q8N394 836 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 TMEM199Q8N511 208 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 IGDCC4Q8TDY8 1250 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 IWS1Q96ST2 819 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 PPP1R12CQ9BZL4 782 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 TBX21Q9UL17 535 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 PCDHA1Q9Y5I3 950 aa15.99■□□□□ 0.15
RBM39-222ENST00000461849 SH2B2O14492 632 aaPredicted RBP15.98■□□□□ 0.15
RBM39-222ENST00000461849 LIFRP42702 1097 aa15.98■□□□□ 0.15
RBM39-222ENST00000461849 PSMC6P62333 389 aa15.98■□□□□ 0.15
RBM39-222ENST00000461849 PPIGQ13427 754 aaKnown RBP eCLIP15.98■□□□□ 0.155e-21■□□□□ 10
RBM39-222ENST00000461849 COL9A3Q14050 684 aaPredicted RBP15.98■□□□□ 0.15
RBM39-222ENST00000461849 ZNF697Q5TEC3 545 aa15.98■□□□□ 0.15
RBM39-222ENST00000461849 NFXL1Q6ZNB6 911 aa15.98■□□□□ 0.15
RBM39-222ENST00000461849 SEPT14Q6ZU15 432 aa15.98■□□□□ 0.15
RBM39-222ENST00000461849 AGXT2Q9BYV1 514 aa15.98■□□□□ 0.15
RBM39-222ENST00000461849 MAP3K20Q9NYL2 800 aaKnown RBP15.98■□□□□ 0.15
RBM39-222ENST00000461849 KPNA6O60684 536 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 CD4P01730 458 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 EIF2AK2P19525 551 aaKnown RBP15.97■□□□□ 0.15
RBM39-222ENST00000461849 TROAPQ12815 778 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 SGMS1Q86VZ5 419 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 SAMD3Q8N6K7 520 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 SLC43A3Q8NBI5 491 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 CTCFLQ8NI51 663 aaPredicted RBP15.97■□□□□ 0.15
RBM39-222ENST00000461849 MTMR8Q96EF0 704 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 PIGSQ96S52 555 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 MTG1Q9BT17 334 aaPredicted RBP15.97■□□□□ 0.15
RBM39-222ENST00000461849 UPF3BQ9BZI7 483 aaKnown RBP15.97■□□□□ 0.15
RBM39-222ENST00000461849 RIOX1Q9H6W3 641 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 SENP2Q9HC62 589 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 COL20A1Q9P218 1284 aa15.97■□□□□ 0.15
RBM39-222ENST00000461849 CCDC69A6NI79 296 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 EIF3JO75822 258 aaKnown RBP15.96■□□□□ 0.15
RBM39-222ENST00000461849 CPA1P15085 419 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 KIF5BP33176 963 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 PURAQ00577 322 aaKnown RBP15.96■□□□□ 0.15
RBM39-222ENST00000461849 FAM109BQ6ICB4 259 aaPredicted RBP15.96■□□□□ 0.15
RBM39-222ENST00000461849 COPS5Q92905 334 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 HIPK3Q9H422 1215 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 LY9Q9HBG7 655 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 PXMP2Q9NR77 195 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 PDRG1Q9NUG6 133 aa15.96■□□□□ 0.15
RBM39-222ENST00000461849 COL6A3P12111 3177 aa15.95■□□□□ 0.14
RBM39-222ENST00000461849 PNMA6FA0A0J9YX94 578 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms