RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 CPLX1O14810 134 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 CD2BP2O95400 341 aaKnown RBP11.72□□□□□ -0.53
SYN3-206ENST00000461446 CALML3P27482 149 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 TRAF1Q13077 416 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 CPLX2Q6PUV4 134 aaKnown RBP11.72□□□□□ -0.53
SYN3-206ENST00000461446 SLC30A10Q6XR72 485 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 EEPD1Q7L9B9 569 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 NECAB1Q8N987 351 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 ZSCAN31Q96LW9 406 aaPredicted RBP11.72□□□□□ -0.53
SYN3-206ENST00000461446 PRO3102Q9H379 93 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 ABHD16BQ9H3Z7 469 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 SEC63Q9UGP8 760 aaKnown RBP11.72□□□□□ -0.53
SYN3-206ENST00000461446 PCDHA1Q9Y5I3 950 aa11.72□□□□□ -0.53
SYN3-206ENST00000461446 ABCB11O95342 1321 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 SYNRGQ9UMZ2 1314 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 LCTP09848 1927 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.71□□□□□ -0.53
SYN3-206ENST00000461446 PRPF3O43395 683 aaKnown RBP11.71□□□□□ -0.53
SYN3-206ENST00000461446 ADAMTS4O75173 837 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 MCM2P49736 904 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 RTP1P59025 263 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 TMEM63BQ5T3F8 832 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 SLC39A5Q6ZMH5 540 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 RNF180Q86T96 592 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 FBXO16Q8IX29 292 aaPredicted RBP11.71□□□□□ -0.53
SYN3-206ENST00000461446 TBC1D5Q92609 795 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 PHKBQ93100 1093 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 GTF3C6Q969F1 213 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
SYN3-206ENST00000461446 PDGFCQ9NRA1 345 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 SH2B1Q9NRF2 756 aaPredicted RBP11.71□□□□□ -0.53
SYN3-206ENST00000461446 PHF24Q9UPV7 400 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 ATP11BQ9Y2G3 1177 aa11.71□□□□□ -0.53
SYN3-206ENST00000461446 MRPL11Q9Y3B7 192 aaKnown RBP11.71□□□□□ -0.53
SYN3-206ENST00000461446 ASB14A6NK59 587 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 PPFIA3O75145 1194 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 DUSP11O75319 330 aaKnown RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 CDKL5O76039 1030 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 SLC34A2O95436 690 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 CTDNEP1O95476 244 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 C6orf222P0C671 652 aaPredicted RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 MAGEA10P43363 369 aaPredicted RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 FXR1P51114 621 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYN3-206ENST00000461446 RPS6P62753 249 aaKnown RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 SSRP1Q08945 709 aaKnown RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 KCNA10Q16322 511 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 TRIM60Q495X7 471 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 TRIM22Q8IYM9 498 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 RGS22Q8NE09 1264 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 KLHDC9Q8NEP7 349 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 GDF15Q99988 308 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 SLC26A6Q9BXS9 759 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 MAF1Q9H063 256 aa11.7□□□□□ -0.54
SYN3-206ENST00000461446 RANBP2P49792 3224 aaKnown RBP11.7□□□□□ -0.54
SYN3-206ENST00000461446 MYH6P13533 1939 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 A0A1W2PQ45 241 aaPredicted RBP11.69□□□□□ -0.54
SYN3-206ENST00000461446 A0A1W2PQY0 241 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 CTAGE5O15320 804 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 SCG2P13521 617 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 SMPD1P17405 629 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 ALDH5A1P51649 535 aaPredicted RBP11.69□□□□□ -0.54
SYN3-206ENST00000461446 ACLYP53396 1101 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 MDM2Q00987 491 aaPredicted RBP11.69□□□□□ -0.54
SYN3-206ENST00000461446 AKAP17AQ02040 695 aaKnown RBP11.69□□□□□ -0.54
SYN3-206ENST00000461446 TNFAIP2Q03169 654 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 PKN1Q16512 942 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 CCSAPQ6IQ19 270 aaPredicted RBP11.69□□□□□ -0.54
SYN3-206ENST00000461446 TAPT1Q6NXT6 567 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 HEATR3Q7Z4Q2 680 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 MCF2L2Q86YR7 1114 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
SYN3-206ENST00000461446 TMX3Q96JJ7 454 aa11.69□□□□□ -0.54
SYN3-206ENST00000461446 STK36Q9NRP7 1315 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 DNAH12Q6ZR08 3092 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 STXBP3O00186 592 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 OPLAHO14841 1288 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 GJA9P57773 515 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 BEX3Q00994 111 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 GHRHRQ02643 423 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 TLE2Q04725 743 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 SNX17Q15036 470 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 GNASQ5JWF2 1037 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 WWC2Q6AWC2 1192 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 CCDC83Q8IWF9 413 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 SAMD3Q8N6K7 520 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
SYN3-206ENST00000461446 MORC4Q8TE76 937 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
SYN3-206ENST00000461446 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
SYN3-206ENST00000461446 LLPHQ9BRT6 129 aaKnown RBP11.68□□□□□ -0.54
SYN3-206ENST00000461446 UPF3AQ9H1J1 476 aaKnown RBP11.68□□□□□ -0.54
SYN3-206ENST00000461446 BARHL2Q9NY43 387 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 COL20A1Q9P218 1284 aa11.68□□□□□ -0.54
SYN3-206ENST00000461446 ADD3Q9UEY8 706 aaKnown RBP11.68□□□□□ -0.54
SYN3-206ENST00000461446 GNEQ9Y223 722 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms