RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 DAGLBQ8NCG7 672 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 RMDN3Q96TC7 470 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 TINF2Q9BSI4 451 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 PXMP2Q9NR77 195 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 BIN2Q9UBW5 565 aaPredicted RBP12.94□□□□□ -0.34
SSBP1-202ENST00000461433 ADD3Q9UEY8 706 aaKnown RBP12.94□□□□□ -0.34
SSBP1-202ENST00000461433 PCDHA4Q9UN74 947 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 RPTORQ8N122 1335 aa12.94□□□□□ -0.34
SSBP1-202ENST00000461433 SNAI1O95863 264 aaPredicted RBP12.93□□□□□ -0.34
SSBP1-202ENST00000461433 GNA11P29992 359 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 CYP2C19P33261 490 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 KRT40Q6A162 431 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 TRMT44Q8IYL2 757 aaKnown RBP12.93□□□□□ -0.34
SSBP1-202ENST00000461433 MSL3Q8N5Y2 521 aaKnown RBP12.93□□□□□ -0.34
SSBP1-202ENST00000461433 SLAIN1Q8ND83 568 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 NSUN6Q8TEA1 469 aaKnown RBP12.93□□□□□ -0.34
SSBP1-202ENST00000461433 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 MCOLN1Q9GZU1 580 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 GLT8D2Q9H1C3 349 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 PCDHA6Q9UN73 950 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 SMC3Q9UQE7 1217 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 PCDHA8Q9Y5H6 950 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 SYNGAP1Q96PV0 1343 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 MYH7BA7E2Y1 1941 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 LOC102724159A0A0B4J2E5 919 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 XBP1P17861 261 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 FOSBP53539 338 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 PGM5Q15124 567 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 PWP2Q15269 919 aaKnown RBP12.93□□□□□ -0.34
SSBP1-202ENST00000461433 MAP3K21Q5TCX8 1036 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 ARMCX2Q7L311 632 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 BLIDQ8IZY5 108 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 FAM184AQ8NB25 1140 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 FBXO18Q8NFZ0 1043 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 IL31RAQ8NI17 732 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 RASGRP4Q8TDF6 673 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 OXER1Q8TDS5 423 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 PGBD1Q96JS3 809 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 KATNBL1Q9H079 304 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
SSBP1-202ENST00000461433 ASB14A6NK59 587 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 EDIL3O43854 480 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 MMP1P03956 469 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 HMGCRP04035 888 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 EIF2AK2P19525 551 aaKnown RBP12.92□□□□□ -0.34
SSBP1-202ENST00000461433 UBXN2AP68543 259 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 GUCY1B3Q02153 619 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 CACNB2Q08289 660 aaPredicted RBP12.92□□□□□ -0.34
SSBP1-202ENST00000461433 PRAMEF19Q5SWL8 479 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 ARHGEF16Q5VV41 709 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 JAKMIP3Q5VZ66 844 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 REXO1Q8N1G1 1221 aaKnown RBP12.92□□□□□ -0.34
SSBP1-202ENST00000461433 TRPV1Q8NER1 839 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 C8orf76Q96K31 380 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 IWS1Q96ST2 819 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
SSBP1-202ENST00000461433 KIAA1217Q5T5P2 1943 aa12.92□□□□□ -0.34
SSBP1-202ENST00000461433 FOSP01100 380 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-202ENST00000461433 INHAP05111 366 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 NR3C2P08235 984 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 AP3B2Q13367 1082 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 SLC9C1Q4G0N8 1177 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 VSIG10LQ86VR7 867 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 BICD2Q8TD16 824 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 CRYGNQ8WXF5 182 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 ANO3Q9BYT9 981 aa12.91□□□□□ -0.34
SSBP1-202ENST00000461433 SPDYE3A6NKU9 549 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-202ENST00000461433 CYBAP13498 195 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 MRPS9P82933 396 aaKnown RBP12.9□□□□□ -0.34
SSBP1-202ENST00000461433 NR5A1Q13285 461 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 IFFO2Q5TF58 517 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 ARMC5Q96C12 935 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 TSHZ2Q9NRE2 1034 aa12.9□□□□□ -0.34
SSBP1-202ENST00000461433 RGS20O76081 388 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 PRKAR2AP13861 404 aaKnown RBP12.89□□□□□ -0.35
SSBP1-202ENST00000461433 SREBF1P36956 1147 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 TRIM29Q14134 588 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 EARS2Q5JPH6 523 aaKnown RBP12.89□□□□□ -0.35
SSBP1-202ENST00000461433 PCNX4Q63HM2 1172 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 MCTP2Q6DN12 878 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 TAPT1Q6NXT6 567 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 DIS3L2Q8IYB7 885 aaKnown RBP12.89□□□□□ -0.35
SSBP1-202ENST00000461433 ZNF333Q96JL9 665 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 ZFP91Q96JP5 570 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-202ENST00000461433 ABHD16BQ9H3Z7 469 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 KIF3AQ9Y496 699 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 CCND3P30281 292 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-202ENST00000461433 KRT2P35908 639 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 PDE4DQ08499 809 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 ACVR2BQ13705 512 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 MTFR1Q15390 333 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 STXBP2Q15833 593 aa12.89□□□□□ -0.35
SSBP1-202ENST00000461433 LARP1BQ659C4 914 aaKnown RBP12.89□□□□□ -0.35
SSBP1-202ENST00000461433 EEPD1Q7L9B9 569 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms