RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 KCNH6Q9H252 994 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 SUGCTQ9HAC7 445 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 STX8Q9UNK0 236 aa20.38■□□□□ 0.85
TOP3A-202ENST00000461127 TRIP12Q14669 1992 aaPredicted RBP20.37■□□□□ 0.85
TOP3A-202ENST00000461127 LCTP09848 1927 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 PTPDC1A2A3K4 754 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 A6NJR5 290 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 CHMP4BP1P59074 171 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 ERVK-21P61565 698 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 PDE4DQ08499 809 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 PTGISQ16647 500 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 PUS10Q3MIT2 529 aaKnown RBP20.37■□□□□ 0.85
TOP3A-202ENST00000461127 KBTBD3Q8NAB2 608 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 SCFD2Q8WU76 684 aa20.37■□□□□ 0.85
TOP3A-202ENST00000461127 PTPRSQ13332 1948 aa20.36■□□□□ 0.85
TOP3A-202ENST00000461127 PATL2C9JE40 543 aaKnown RBP20.36■□□□□ 0.85
TOP3A-202ENST00000461127 ZFYP08048 801 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-202ENST00000461127 PTCRAQ6ISU1 281 aaPredicted RBP20.36■□□□□ 0.85
TOP3A-202ENST00000461127 CNKSR3Q6P9H4 555 aa20.36■□□□□ 0.85
TOP3A-202ENST00000461127 SIRT2Q8IXJ6 389 aa20.36■□□□□ 0.85
TOP3A-202ENST00000461127 PPP1R13LQ8WUF5 828 aa20.36■□□□□ 0.85
TOP3A-202ENST00000461127 RNF113AO15541 343 aaKnown RBP20.35■□□□□ 0.85
TOP3A-202ENST00000461127 EFCAB14O75071 495 aa20.35■□□□□ 0.85
TOP3A-202ENST00000461127 GJB5O95377 273 aa20.35■□□□□ 0.85
TOP3A-202ENST00000461127 SELPP16109 830 aa20.35■□□□□ 0.85
TOP3A-202ENST00000461127 TMCO2Q7Z6W1 182 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-202ENST00000461127 IFNL3Q8IZI9 196 aa20.35■□□□□ 0.85
TOP3A-202ENST00000461127 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.35■□□□□ 0.85
TOP3A-202ENST00000461127 LRRCC1Q9C099 1032 aa20.35■□□□□ 0.85
TOP3A-202ENST00000461127 ECHDC1Q9NTX5 307 aa20.35■□□□□ 0.85
TOP3A-202ENST00000461127 ABHD14A-ACY1A0A1B0GW23 586 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 B4DLN1 442 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 DCXO43602 365 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 IL9P15248 144 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 MRPL12P52815 198 aaKnown RBP20.34■□□□□ 0.85
TOP3A-202ENST00000461127 DEFB103AP81534 67 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 NHLH1Q02575 133 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 CCDC96Q2M329 555 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 LRRC8DQ7L1W4 858 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 CTNNA3Q9UI47 895 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 MTMR7Q9Y216 660 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 FAM50BQ9Y247 325 aa20.34■□□□□ 0.85
TOP3A-202ENST00000461127 LINC01553A4QN01 128 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 GRXCR2A6NFK2 248 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 TSPY2A6NKD2 308 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 NFIBO00712 420 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 TXNP10599 105 aaKnown RBP20.33■□□□□ 0.85
TOP3A-202ENST00000461127 CALML3P27482 149 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 GPATCH3Q96I76 525 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 NAPBQ9H115 298 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 RANBP17Q9H2T7 1088 aaKnown RBP20.33■□□□□ 0.85
TOP3A-202ENST00000461127 PNMA2Q9UL42 364 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 DDX19BQ9UMR2 479 aa20.33■□□□□ 0.85
TOP3A-202ENST00000461127 SIP14410 1827 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 PPARAQ07869 468 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 IKBKEQ14164 716 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 RNF207Q6ZRF8 634 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 FBXO22Q8NEZ5 403 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 DCAF4Q8WV16 495 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 CHMP4BQ9H444 224 aaKnown RBP20.32■□□□□ 0.84
TOP3A-202ENST00000461127 ZBTB40Q9NUA8 1239 aa20.32■□□□□ 0.84
TOP3A-202ENST00000461127 M0R2C6 588 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 CXCL10P02778 98 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 PTPROQ16827 1216 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 SESTD1Q86VW0 696 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 DNERQ8NFT8 737 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 COPS5Q92905 334 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 FBXL18Q96ME1 805 aa20.31■□□□□ 0.84
TOP3A-202ENST00000461127 SYDE2Q5VT97 1194 aa20.3■□□□□ 0.84
TOP3A-202ENST00000461127 GDF6Q6KF10 455 aaPredicted RBP20.3■□□□□ 0.84
TOP3A-202ENST00000461127 FAM117BQ6P1L5 589 aa20.3■□□□□ 0.84
TOP3A-202ENST00000461127 SLC30A10Q6XR72 485 aa20.3■□□□□ 0.84
TOP3A-202ENST00000461127 MRPL38Q96DV4 380 aaKnown RBP20.3■□□□□ 0.84
TOP3A-202ENST00000461127 INSL6Q9Y581 213 aa20.3■□□□□ 0.84
TOP3A-202ENST00000461127 SUPT16HQ9Y5B9 1047 aaKnown RBP20.3■□□□□ 0.84
TOP3A-202ENST00000461127 CKBP12277 381 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 EDNRBP24530 442 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 SLC16A2P36021 539 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 RBL2Q08999 1139 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 GPNMBQ14956 572 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 TIGD5Q53EQ6 642 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 BTNL9Q6UXG8 535 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 RASGRP2Q7LDG7 609 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 NEK9Q8TD19 979 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 SNX27Q96L92 541 aa20.29■□□□□ 0.84
TOP3A-202ENST00000461127 POTEB3A0JP26 581 aa20.28■□□□□ 0.84
TOP3A-202ENST00000461127 SMARCA5O60264 1052 aaPredicted RBP20.28■□□□□ 0.84
TOP3A-202ENST00000461127 NBNO60934 754 aa20.28■□□□□ 0.84
TOP3A-202ENST00000461127 CASTP20810 708 aaKnown RBP20.28■□□□□ 0.84
TOP3A-202ENST00000461127 RPS6P62753 249 aaKnown RBP20.28■□□□□ 0.84
TOP3A-202ENST00000461127 POTEBQ6S5H4 581 aa20.28■□□□□ 0.84
TOP3A-202ENST00000461127 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
TOP3A-202ENST00000461127 IL17RBQ9NRM6 502 aa20.28■□□□□ 0.84
TOP3A-202ENST00000461127 PRKAG3Q9UGI9 489 aa20.28■□□□□ 0.84
TOP3A-202ENST00000461127 H3BQ06 376 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-202ENST00000461127 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
TOP3A-202ENST00000461127 NMT2O60551 498 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 GH1P01241 217 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 MMP3P08254 477 aa20.27■□□□□ 0.84
TOP3A-202ENST00000461127 TTBK2Q6IQ55 1244 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms