RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 CTDP1Q9Y5B0 961 aaPredicted RBP9.42□□□□□ -0.9
SND1-202ENST00000461056 RBM47A0AV96 593 aaKnown RBP9.41□□□□□ -0.9
SND1-202ENST00000461056 RGS20O76081 388 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 DEXIO95424 95 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 HOXA13P31271 388 aaPredicted RBP9.41□□□□□ -0.9
SND1-202ENST00000461056 SLC4A3P48751 1232 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 ALDH5A1P51649 535 aaPredicted RBP9.41□□□□□ -0.9
SND1-202ENST00000461056 TRAF1Q13077 416 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 LHX8Q68G74 356 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 TAPT1Q6NXT6 567 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 USP17L6PQ6QN14 398 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 ARMCX2Q7L311 632 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 CCDC83Q8IWF9 413 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 DAGLBQ8NCG7 672 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 TNFRSF25Q93038 417 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 DDX11Q96FC9 970 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 ABHD8Q96I13 439 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 ZSCAN31Q96LW9 406 aaPredicted RBP9.41□□□□□ -0.9
SND1-202ENST00000461056 TAAR1Q96RJ0 339 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 PDCD2LQ9BRP1 358 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 UNC93B1Q9H1C4 597 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 SH3GLB2Q9NR46 395 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 PXMP2Q9NR77 195 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 GJB4Q9NTQ9 266 aa9.41□□□□□ -0.9
SND1-202ENST00000461056 RANBP2P49792 3224 aaKnown RBP9.4□□□□□ -0.9
SND1-202ENST00000461056 GCOM1H8Y6P7 765 aaPredicted RBP9.4□□□□□ -0.9
SND1-202ENST00000461056 CTAGE5O15320 804 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 ST18O60284 1047 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 CDKL5O76039 1030 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 POLR2MP0CAP2 368 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 CALML3P27482 149 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 CCND3P30281 292 aaPredicted RBP9.4□□□□□ -0.9
SND1-202ENST00000461056 MCM2P49736 904 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 NKX3-2P78367 333 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 UBE2SQ16763 222 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 SLC9C1Q4G0N8 1177 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 UBE2Q1Q7Z7E8 422 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 DPP9Q86TI2 863 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 VSIG10LQ86VR7 867 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 CCAR1Q8IX12 1150 aaKnown RBP9.4□□□□□ -0.9
SND1-202ENST00000461056 PHF20Q9BVI0 1012 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 PSTPIP2Q9H939 334 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.4□□□□□ -0.9
SND1-202ENST00000461056 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 DNAH12Q6ZR08 3092 aa9.4□□□□□ -0.9
SND1-202ENST00000461056 CPLX1O14810 134 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 CFBP00751 764 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 CCL5P13501 91 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 ADCY7P51828 1080 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 NAPAP54920 295 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 MRPS9P82933 396 aaKnown RBP9.39□□□□□ -0.91
SND1-202ENST00000461056 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
SND1-202ENST00000461056 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 PRAMEF19Q5SWL8 479 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 TMEM63BQ5T3F8 832 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 MFSD14CQ5VZR4 134 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 CCDC62Q6P9F0 684 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 NSUN6Q8TEA1 469 aaKnown RBP9.39□□□□□ -0.91
SND1-202ENST00000461056 INPP4AQ96PE3 977 aaPredicted RBP9.39□□□□□ -0.91
SND1-202ENST00000461056 IWS1Q96ST2 819 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 RMDN3Q96TC7 470 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.39□□□□□ -0.91
SND1-202ENST00000461056 SLC5A4Q9NY91 659 aa9.39□□□□□ -0.91
SND1-202ENST00000461056 ORC3Q9UBD5 711 aaPredicted RBP9.39□□□□□ -0.91
SND1-202ENST00000461056 RBBP6Q7Z6E9 1792 aaKnown RBP9.39□□□□□ -0.91
SND1-202ENST00000461056 SMCO2A6NFE2 343 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 ASB14A6NK59 587 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 ARIH2O95376 493 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 GJB1P08034 283 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 NR3C2P08235 984 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 EIF2AK2P19525 551 aaKnown RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 PTGS1P23219 599 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 SREBF1P36956 1147 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 AP3B2Q13367 1082 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 ACVR2BQ13705 512 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 PGM5Q15124 567 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 CPLX2Q6PUV4 134 aaKnown RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 FBXO16Q8IX29 292 aaPredicted RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 TRIM22Q8IYM9 498 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 TNS4Q8IZW8 715 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 CUL5Q93034 780 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 CWC22Q9HCG8 908 aaKnown RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 VTA1Q9NP79 307 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 PDGFCQ9NRA1 345 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 TMEM260Q9NX78 707 aa9.38□□□□□ -0.91
SND1-202ENST00000461056 ADD3Q9UEY8 706 aaKnown RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 GNEQ9Y223 722 aaKnown RBP9.38□□□□□ -0.91
SND1-202ENST00000461056 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.37□□□□□ -0.91
SND1-202ENST00000461056 SEPT4O43236 478 aa9.37□□□□□ -0.91
SND1-202ENST00000461056 ITGB5P18084 799 aa9.37□□□□□ -0.91
SND1-202ENST00000461056 GJA8P48165 433 aa9.37□□□□□ -0.91
SND1-202ENST00000461056 MRPL12P52815 198 aaKnown RBP9.37□□□□□ -0.91
SND1-202ENST00000461056 EARS2Q5JPH6 523 aaKnown RBP9.37□□□□□ -0.91
SND1-202ENST00000461056 PCNX4Q63HM2 1172 aa9.37□□□□□ -0.91
SND1-202ENST00000461056 CCSAPQ6IQ19 270 aaPredicted RBP9.37□□□□□ -0.91
SND1-202ENST00000461056 XRRA1Q6P2D8 792 aa9.37□□□□□ -0.91
SND1-202ENST00000461056 CCDC148Q8NFR7 591 aa9.37□□□□□ -0.91
SND1-202ENST00000461056 RASGRP4Q8TDF6 673 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms