RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 MYL3P08590 195 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 CYP2C9P11712 490 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 TTLL4Q14679 1199 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 CCDC96Q2M329 555 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 FAM47CQ5HY64 1035 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 FAM122AQ96E09 287 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 GMCL1Q96IK5 515 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 PURBQ96QR8 312 aaKnown RBP17.18■□□□□ 0.34
NCK1-202ENST00000460960 SEZ6LQ9BYH1 1024 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 ALDH8A1Q9H2A2 487 aaPredicted RBP17.18■□□□□ 0.34
NCK1-202ENST00000460960 RNF41Q9H4P4 317 aaPredicted RBP17.18■□□□□ 0.34
NCK1-202ENST00000460960 TRMT13Q9NUP7 481 aaKnown RBP17.18■□□□□ 0.34
NCK1-202ENST00000460960 ZSWIM5Q9P217 1185 aa17.18■□□□□ 0.34
NCK1-202ENST00000460960 CA3P07451 260 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 KCNQ1P51787 676 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 SCN5AQ14524 2016 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 AAK1Q2M2I8 961 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 ADCK5Q3MIX3 580 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 TMEM67Q5HYA8 995 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 RCSD1Q6JBY9 416 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 TAPT1Q6NXT6 567 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 USP26Q9BXU7 913 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 VTA1Q9NP79 307 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 GPHNQ9NQX3 736 aaPredicted RBP17.17■□□□□ 0.34
NCK1-202ENST00000460960 CYP39A1Q9NYL5 469 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 PRR12Q9ULL5 1215 aa17.17■□□□□ 0.34
NCK1-202ENST00000460960 PCP11498 1178 aaKnown RBP17.16■□□□□ 0.34
NCK1-202ENST00000460960 PLA2G5P39877 138 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 NOVP48745 357 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 ANTXR2P58335 489 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 PPP1R13LQ8WUF5 828 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 ESR2Q92731 530 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 Q9Y3F1 56 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 TNKSO95271 1327 aa17.16■□□□□ 0.34
NCK1-202ENST00000460960 PRRC2BQ5JSZ5 2229 aaKnown RBP17.16■□□□□ 0.34
NCK1-202ENST00000460960 REC8O95072 547 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 SUPT20HL2P0C7V6 817 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 ACTN1P12814 892 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 HSPA4P34932 840 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 CHMP4BP1P59074 171 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 MB21D2Q8IYB1 491 aaPredicted RBP17.15■□□□□ 0.34
NCK1-202ENST00000460960 OR6J1Q8NGC5 347 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 KCNB2Q92953 911 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 WDR11Q9BZH6 1224 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 SENP2Q9HC62 589 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 LCTP09848 1927 aa17.15■□□□□ 0.34
NCK1-202ENST00000460960 CHD7Q9P2D1 2997 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 PTPDC1A2A3K4 754 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 PFKMP08237 780 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 BMP1P13497 986 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
NCK1-202ENST00000460960 DUSP28Q4G0W2 176 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 ARNTL2Q8WYA1 636 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 KRT23Q9C075 422 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
NCK1-202ENST00000460960 TCP11L1Q9NUJ3 509 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 ADD3Q9UEY8 706 aaKnown RBP17.14■□□□□ 0.33
NCK1-202ENST00000460960 SNX14Q9Y5W7 946 aa17.14■□□□□ 0.33
NCK1-202ENST00000460960 CPA1P15085 419 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 CPT1AP50416 773 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 ALDH5A1P51649 535 aaPredicted RBP17.13■□□□□ 0.33
NCK1-202ENST00000460960 KRT40Q6A162 431 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 ENAHQ8N8S7 591 aaPredicted RBP17.13■□□□□ 0.33
NCK1-202ENST00000460960 RETREG2Q8NC44 543 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 VWCEQ96DN2 955 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 TMEM47Q9BQJ4 181 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 MTG1Q9BT17 334 aaPredicted RBP17.13■□□□□ 0.33
NCK1-202ENST00000460960 CNNM2Q9H8M5 875 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 NOD1Q9Y239 953 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 MTCH2Q9Y6C9 303 aa17.13■□□□□ 0.33
NCK1-202ENST00000460960 EPOPA6NHQ4 379 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 PLA2G6O60733 806 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 ICAM1P05362 532 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 CALML3P27482 149 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 SLC16A2P36021 539 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 PURAQ00577 322 aaKnown RBP17.12■□□□□ 0.33
NCK1-202ENST00000460960 SEC23AQ15436 765 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 BRDTQ58F21 947 aaPredicted RBP17.12■□□□□ 0.33
NCK1-202ENST00000460960 NCOA7Q8NI08 942 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 TCEANC2Q96MN5 208 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 ZSCAN10Q96SZ4 725 aaPredicted RBP17.12■□□□□ 0.33
NCK1-202ENST00000460960 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 BDP1A6H8Y1 2624 aa17.12■□□□□ 0.33
NCK1-202ENST00000460960 KIF28PB7ZC32 967 aa17.11■□□□□ 0.33
NCK1-202ENST00000460960 NFIBO00712 420 aa17.11■□□□□ 0.33
NCK1-202ENST00000460960 NBPF20Q3BBV1 942 aa17.11■□□□□ 0.33
NCK1-202ENST00000460960 TSGA10IPQ3SY00 556 aa17.11■□□□□ 0.33
NCK1-202ENST00000460960 TTBK2Q6IQ55 1244 aa17.11■□□□□ 0.33
NCK1-202ENST00000460960 RALYLQ86SE5 291 aaKnown RBP17.11■□□□□ 0.33
NCK1-202ENST00000460960 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
NCK1-202ENST00000460960 PDE4DQ08499 809 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 TRDNQ13061 729 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 PPP2R5BQ15173 497 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 SYDE2Q5VT97 1194 aa17.1■□□□□ 0.33
NCK1-202ENST00000460960 RNF20Q5VTR2 975 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms