RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 SYDE1Q6ZW31 735 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 NOP9Q86U38 636 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 C1QL4Q86Z23 238 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 USHBP1Q8N6Y0 703 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 FBXO15Q8NCQ5 510 aaPredicted RBP6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 TMEM59LQ9UK28 342 aa6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 MAP2P11137 1827 aaKnown RBP6.29□□□□□ -1.4
ATPAF1-203ENST00000460928 CGNL1Q0VF96 1302 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 STK10O94804 968 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 KRT1P04264 644 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 FGRP09769 529 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 HSP90B1P14625 803 aaKnown RBP6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 RAC2P15153 192 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 CFPP27918 469 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 GBP2P32456 591 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 PRELPP51888 382 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 GAB4Q2WGN9 574 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 CCDC84Q86UT8 332 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 KIAA0825Q8IV33 1275 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 RASGRP4Q8TDF6 673 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 ACSF2Q96CM8 615 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 Q96M66 194 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 DPH2Q9BQC3 489 aaPredicted RBP6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 SLAMF8Q9P0V8 285 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 POLKQ9UBT6 870 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 ADAMTS1Q9UHI8 967 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 SLIT2O94813 1529 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 NRAPQ86VF7 1730 aa6.28□□□□□ -1.4
ATPAF1-203ENST00000460928 USP54Q70EL1 1684 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 LMO7Q8WWI1 1683 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 COL14A1Q05707 1796 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 F6X3S4 739 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 HPXP02790 462 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 EIF4A3P38919 411 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 AMPHP49418 695 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 EVA1CP58658 441 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 CCDC184Q52MB2 194 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 TTC6Q86TZ1 520 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 SIAH1Q8IUQ4 282 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 UNC5CLQ8IV45 518 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 ABHD4Q8TB40 342 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 ZSCAN18Q8TBC5 510 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 TMEM74Q96NL1 305 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 DUSP15Q9H1R2 295 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 TRIT1Q9H3H1 467 aaKnown RBP6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 BRD4O60885 1362 aaPredicted RBP6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 RGPD1P0DJD0 1748 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 ANKRD26Q9UPS8 1709 aa6.27□□□□□ -1.41
ATPAF1-203ENST00000460928 DNAJC25-GNG10A0A024R161 153 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 SRFP11831 508 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 HOXC9P31274 260 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 MTHFSP49914 203 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 MAP3K11Q16584 847 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 RALGPS1Q5JS13 557 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 KCNH5Q8NCM2 988 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 PPP1R13LQ8WUF5 828 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 CYB5D2Q8WUJ1 264 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 ZNF296Q8WUU4 475 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 GPR62Q9BZJ7 368 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 NSUN3Q9H649 340 aaKnown RBP6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 CPDO75976 1380 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 COL5A2P05997 1499 aaPredicted RBP6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 GLI3P10071 1580 aa6.26□□□□□ -1.41
ATPAF1-203ENST00000460928 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 NFIBO00712 420 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 C1QTNF9P0C862 333 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 PPP2R1AP30153 589 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 TMEM201Q5SNT2 666 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 NBPF6Q5VWK0 638 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 DIEXFQ68CQ4 756 aaKnown RBP6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 LRRC56Q8IYG6 542 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 PHC3Q8NDX5 983 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 MYLIPQ8WY64 445 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 IP6K1Q92551 441 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 EAF1Q96JC9 268 aaPredicted RBP6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 NBPF4Q96M43 638 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 EPB41L4BQ9H329 900 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 AATKQ6ZMQ8 1374 aa6.25□□□□□ -1.41
ATPAF1-203ENST00000460928 SSBP05455 408 aaKnown RBP eCLIP6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 MED14OSP0DP75 135 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 EIF4A2Q14240 407 aaKnown RBP6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 VPS72Q15906 364 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 FBXL19Q6PCT2 694 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 LCNL1Q6ZST4 164 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 TOM1L2Q6ZVM7 507 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 CREG2Q8IUH2 290 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 DTWD2Q8NBA8 298 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 DIRC2Q96SL1 478 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 ZSWIM4Q9H7M6 989 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 SPON1Q9HCB6 807 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 GPATCH2Q9NW75 528 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 TLR6Q9Y2C9 796 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 SPATA31A1Q5TZJ5 1347 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 SPATA31A5Q5VU36 1347 aa6.24□□□□□ -1.41
ATPAF1-203ENST00000460928 SPATA31A7Q8IWB4 1347 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms