RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 RAD9BQ6WBX8 426 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 ANKS4BQ8N8V4 417 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 CAPS2Q9BXY5 557 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 RNF14Q9UBS8 474 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 SERPINB13Q9UIV8 391 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 PLEKHG2Q9H7P9 1386 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 MOCS3O95396 460 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 FXR1P51114 621 aaKnown RBP eCLIP13.28□□□□□ -0.28
CPNE6-202ENST00000460657 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
CPNE6-202ENST00000460657 SMCR8Q8TEV9 937 aaPredicted RBP13.28□□□□□ -0.28
CPNE6-202ENST00000460657 H2AFZP0C0S5 128 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 GTF2A1P52655 376 aaPredicted RBP13.27□□□□□ -0.28
CPNE6-202ENST00000460657 HNRNPH2P55795 449 aaKnown RBP13.27□□□□□ -0.28
CPNE6-202ENST00000460657 APBA1Q02410 837 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 EHHADHQ08426 723 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 CALCOCO2Q13137 446 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 SBK1Q52WX2 424 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 SLFN13Q68D06 897 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 H2AFVQ71UI9 128 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 SLC44A5Q8NCS7 719 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 U2AF1L4Q8WU68 220 aaKnown RBP13.27□□□□□ -0.28
CPNE6-202ENST00000460657 DDX12PQ92771 950 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 CCSER1Q9C0I3 900 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 VEZTQ9HBM0 779 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 BZW2Q9Y6E2 419 aaKnown RBP13.27□□□□□ -0.28
CPNE6-202ENST00000460657 BBOX1O75936 387 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 NTSR2O95665 410 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 CFBP00751 764 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 NR2F2P24468 414 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 ORC2Q13416 577 aaPredicted RBP13.27□□□□□ -0.28
CPNE6-202ENST00000460657 TBC1D9BQ66K14 1250 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 DAAM2Q86T65 1068 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 UBL4BQ8N7F7 174 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 CCDC77Q9BR77 488 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 AMFRQ9UKV5 643 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 ZBTB21Q9ULJ3 1066 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 MST1RQ04912 1400 aa13.27□□□□□ -0.28
CPNE6-202ENST00000460657 JCADQ9P266 1359 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 SMIM23A6NLE4 172 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 FOSP01100 380 aaPredicted RBP13.27□□□□□ -0.29
CPNE6-202ENST00000460657 DCCP43146 1447 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 SCNN1DP51172 638 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 EXOC3L4Q17RC7 722 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 TRIM31Q9BZY9 425 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 PVALEFA0A1B0GWK0 134 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 KIF4AO95239 1232 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 CTNNA2P26232 953 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 GUCY2DQ02846 1103 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 CLUL1Q15846 466 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
CPNE6-202ENST00000460657 C12orf60Q5U649 245 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 FBXO11Q86XK2 927 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 TPH2Q8IWU9 490 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 ADSSL1Q8N142 457 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 STAG2Q8N3U4 1231 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 CPVLQ9H3G5 476 aa13.27□□□□□ -0.29
CPNE6-202ENST00000460657 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.29
CPNE6-202ENST00000460657 CNTNAP5Q8WYK1 1306 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 SPOPO43791 374 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 TROAPQ12815 778 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 CCDC114Q96M63 670 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 PKD2L1Q9P0L9 805 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 CTTNBP2NLQ9P2B4 639 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 USP21Q9UK80 565 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 CAPN11Q9UMQ6 739 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 ATP6V0A2Q9Y487 856 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 TCRBV5S4A2TA0A5A2 114 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 BCRP11274 1271 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 ALDH1B1P30837 517 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 PPP1R7Q15435 360 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 BCAS4Q8TDM0 211 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 PPP1R1BQ9UD71 204 aaPredicted RBP13.26□□□□□ -0.29
CPNE6-202ENST00000460657 DESP17661 470 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 IBSPP21815 317 aaPredicted RBP13.26□□□□□ -0.29
CPNE6-202ENST00000460657 GYS2P54840 703 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 AMNQ9BXJ7 453 aa13.26□□□□□ -0.29
CPNE6-202ENST00000460657 PNMA6FA0A0J9YX94 578 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 KRIT1O00522 736 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 SERPING1P05155 500 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 CXCR5P32302 372 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 ICA1Q05084 483 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 CEP85LQ5SZL2 805 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 FAM196AQ6ZSG2 479 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 CCDC25Q86WR0 208 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 PCDHA6Q9UN73 950 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 PCDHA8Q9Y5H6 950 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 EIF3CLB5ME19 914 aaKnown RBP13.25□□□□□ -0.29
CPNE6-202ENST00000460657 PPP1R3GB7ZBB8 358 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 SRGAP2O75044 1071 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 GYPCP04921 128 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 HOOK3Q86VS8 718 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 EIF3CQ99613 913 aaKnown RBP13.25□□□□□ -0.29
CPNE6-202ENST00000460657 RAB17Q9H0T7 212 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 GAS7O60861 476 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 H2AFXP16104 143 aaPredicted RBP13.25□□□□□ -0.29
CPNE6-202ENST00000460657 SLC16A2P36021 539 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 ARHGAP25P42331 645 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 PABPC4Q13310 644 aaKnown RBP eCLIP13.25□□□□□ -0.29
CPNE6-202ENST00000460657 KCTD1Q719H9 257 aa13.25□□□□□ -0.29
CPNE6-202ENST00000460657 KRT12Q99456 494 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms