RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 CLMNQ96JQ2 1002 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 BIN2Q9UBW5 565 aaPredicted RBP19.05■□□□□ 0.64
YIPF3-205ENST00000460547 TPM2P07951 284 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 LBX1P52954 281 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 SEPT2Q15019 361 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 SPATA1Q5VX52 437 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 RRAGBQ5VZM2 374 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 SLFN13Q68D06 897 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 KCTD1Q719H9 257 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 MIGA2Q7L4E1 593 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 CUL5Q93034 780 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 KCND1Q9NSA2 647 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 TMEM260Q9NX78 707 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 CSADQ9Y600 493 aa19.05■□□□□ 0.64
YIPF3-205ENST00000460547 SYNRGQ9UMZ2 1314 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 PPP1R3GB7ZBB8 358 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 USP17L10C9JJH3 530 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 CASP1P29466 404 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 SLC1A4P43007 532 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 KCNJ6P48051 423 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 MRPL12P52815 198 aaKnown RBP19.04■□□□□ 0.64
YIPF3-205ENST00000460547 ARID5BQ14865 1188 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 SPRYD7Q5W111 196 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 VSTM4Q8IW00 320 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 IGSF22Q8N9C0 903 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 MTMR9Q96QG7 549 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 KBTBD4Q9NVX7 518 aa19.04■□□□□ 0.64
YIPF3-205ENST00000460547 SKILP12757 684 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 CD44P16070 742 aaKnown RBP19.03■□□□□ 0.64
YIPF3-205ENST00000460547 SLC16A2P36021 539 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 FXR2P51116 673 aaKnown RBP eCLIP19.03■□□□□ 0.64
YIPF3-205ENST00000460547 KCNB1Q14721 858 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 SHROOM1Q2M3G4 852 aaPredicted RBP19.03■□□□□ 0.64
YIPF3-205ENST00000460547 PPP4R3AQ6IN85 833 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 CABP7Q86V35 215 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 TRMT44Q8IYL2 757 aaKnown RBP19.03■□□□□ 0.64
YIPF3-205ENST00000460547 ZNF341Q9BYN7 854 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 ELP3Q9H9T3 547 aa19.03■□□□□ 0.64
YIPF3-205ENST00000460547 R3HCC1Q9Y3T6 440 aaKnown RBP19.03■□□□□ 0.64
YIPF3-205ENST00000460547 THSD7BQ9C0I4 1608 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 PP2D1A8MPX8 630 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 RPN1P04843 607 aaKnown RBP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 ZBTB48P10074 688 aaPredicted RBP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 HSPA8P11142 646 aaKnown RBP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 GCFC2P16383 781 aaKnown RBP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 SREBF2Q12772 1141 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 ZNF658Q5TYW1 1059 aaPredicted RBP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 CDKAL1Q5VV42 579 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 WRNIP1Q96S55 665 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 NAP1L4Q99733 375 aaKnown RBP19.02■□□□□ 0.64
YIPF3-205ENST00000460547 PRDM10Q9NQV6 1147 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 INTS13Q9NVM9 706 aa19.02■□□□□ 0.64
YIPF3-205ENST00000460547 EDIL3O43854 480 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 TRPA1O75762 1119 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 SFPQP23246 707 aaKnown RBP eCLIP19.01■□□□□ 0.63
YIPF3-205ENST00000460547 CDC25AP30304 524 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 QRICH1Q2TAL8 776 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 COL13A1Q5TAT6 717 aaPredicted RBP19.01■□□□□ 0.63
YIPF3-205ENST00000460547 ARMCX5Q6P1M9 558 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.01■□□□□ 0.63
YIPF3-205ENST00000460547 POTEDQ86YR6 584 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 WNK4Q96J92 1243 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 PRIMPOLQ96LW4 560 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 BLZF1Q9H2G9 400 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 TSKSQ9UJT2 592 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 F5H6K3 240 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 GDF11O95390 407 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 INHBEP58166 350 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 KLRC3Q07444 240 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 CALCRLQ16602 461 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 DNTTIP2Q5QJE6 756 aaKnown RBP19.01■□□□□ 0.63
YIPF3-205ENST00000460547 MCTP2Q6DN12 878 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 BTNL9Q6UXG8 535 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 RASSF8Q8NHQ8 419 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 STAMQ92783 540 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 RNF186Q9NXI6 227 aa19.01■□□□□ 0.63
YIPF3-205ENST00000460547 MANSC4A6NHS7 340 aaPredicted RBP19■□□□□ 0.63
YIPF3-205ENST00000460547 NDUFB10O96000 172 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 GH2P01242 217 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 TM4SF4P48230 202 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 VGLL4Q14135 290 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 CDC37Q16543 378 aaPredicted RBP19■□□□□ 0.63
YIPF3-205ENST00000460547 TEX2Q8IWB9 1127 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 GTPBP4Q9BZE4 634 aaKnown RBP19■□□□□ 0.63
YIPF3-205ENST00000460547 PSTPIP2Q9H939 334 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 SAGE1Q9NXZ1 904 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 RWDD2AQ9UIY3 292 aa19■□□□□ 0.63
YIPF3-205ENST00000460547 A0A1B0GTH6 734 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 NRDCO43847 1150 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 PLCG1P19174 1290 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 PDIA5Q14554 519 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 UBE2SQ16763 222 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 TMEM266Q2M3C6 531 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 APTXQ7Z2E3 356 aaKnown RBP18.99■□□□□ 0.63
YIPF3-205ENST00000460547 ZKSCAN4Q969J2 545 aaPredicted RBP18.99■□□□□ 0.63
YIPF3-205ENST00000460547 OPTNQ96CV9 577 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 MMTAG2Q9BU76 263 aaKnown RBP18.99■□□□□ 0.63
YIPF3-205ENST00000460547 RAB34Q9BZG1 259 aa18.99■□□□□ 0.63
YIPF3-205ENST00000460547 SAMSN1Q9NSI8 373 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms