RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 IWS1Q96ST2 819 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 PORCNQ9H237 461 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 FOXP1Q9H334 677 aaPredicted RBP12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 CYP39A1Q9NYL5 469 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 RIPK3Q9Y572 518 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 ATP6V1DQ9Y5K8 247 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 THSD7BQ9C0I4 1608 aa12.61□□□□□ -0.39
SMNDC1-203ENST00000460483 PPP1R11O60927 126 aaPredicted RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 HSPA1AP0DMV8 641 aaKnown RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 HSPA1BP0DMV9 641 aaKnown RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 FDPSP14324 419 aaKnown RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 ADORA2AP29274 412 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 NUCB2P80303 420 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 MAP2K5Q13163 448 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 BAATQ14032 418 aaPredicted RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 ARHGEF16Q5VV41 709 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 KRT40Q6A162 431 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 CLEC4DQ8WXI8 215 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 PHF20Q9BVI0 1012 aa12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 ZSCAN16Q9H4T2 348 aaPredicted RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 A1CFQ9NQ94 594 aaKnown RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 NOL7Q9UMY1 257 aaKnown RBP12.6□□□□□ -0.39
SMNDC1-203ENST00000460483 NFIBO00712 420 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 PPFIA3O75145 1194 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 HOXC6P09630 235 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 IRF5Q13568 498 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 SLC35G1Q2M3R5 365 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 GNPTABQ3T906 1256 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 MUM1L1Q5H9M0 696 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 RAET1EQ8TD07 263 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 RMDN3Q96TC7 470 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 APBA2Q99767 749 aa12.59□□□□□ -0.39
SMNDC1-203ENST00000460483 STX6O43752 255 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 PDE4DQ08499 809 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 NONOQ15233 471 aaKnown RBP eCLIP12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 STXBP2Q15833 593 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 MORN1Q5T089 497 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 MCTP1Q6DN14 999 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 KCNV1Q6PIU1 500 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 BRAPQ7Z569 592 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 FCHSD1Q86WN1 690 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 DIS3L2Q8IYB7 885 aaKnown RBP12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 SYTL5Q8TDW5 730 aaPredicted RBP12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 CDHR1Q96JP9 859 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 IPO9Q96P70 1041 aaKnown RBP12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 SRRDQ9UH36 339 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 NRBP1Q9UHY1 535 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 CNPY2Q9Y2B0 182 aa12.58□□□□□ -0.4
SMNDC1-203ENST00000460483 DNAJC25-GNG10A0A024R161 153 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 VPS37CA5D8V6 355 aaPredicted RBP12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 MEIS2O14770 477 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 MAFGO15525 162 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 SYT1P21579 422 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 CCND2P30279 289 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 ZNF76P36508 570 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 TRAPPC10P48553 1259 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 USP11P51784 963 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 ORC2Q13416 577 aaPredicted RBP12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 OLFML2BQ68BL8 750 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 POTEEQ6S8J3 1075 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 FAM133AQ8N9E0 248 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 PXYLP1Q8TE99 480 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 PRDM10Q9NQV6 1147 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 TRIM17Q9Y577 477 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
SMNDC1-203ENST00000460483 EIF3JO75822 258 aaKnown RBP12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 HOXA13P31271 388 aaPredicted RBP12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 FLT3LGP49771 235 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 ZNF792Q3KQV3 632 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 RILPL1Q5EBL4 403 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 USP17L6PQ6QN14 398 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 CTU1Q7Z7A3 348 aaKnown RBP12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 NLRX1Q86UT6 975 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 NOSTRINQ8IVI9 506 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 ANO3Q9BYT9 981 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 R3HDMLQ9H3Y0 253 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 BIN2Q9UBW5 565 aaPredicted RBP12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 TCEAL9Q9UHQ7 104 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 KCNJ14Q9UNX9 436 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 SYNGAP1Q96PV0 1343 aa12.56□□□□□ -0.4
SMNDC1-203ENST00000460483 PTPRFP10586 1907 aa12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 FOXN1O15353 648 aa12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 BMP15O95972 392 aa12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 HSPA8P11142 646 aaKnown RBP12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 CYP2B6P20813 491 aa12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 U2AF2P26368 475 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 CLK2P49760 499 aaKnown RBP12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 ALDH5A1P51649 535 aaPredicted RBP12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 LBX1P52954 281 aa12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 UBXN2AP68543 259 aa12.55□□□□□ -0.4
SMNDC1-203ENST00000460483 SETQ01105 290 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms