RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 MRPL44Q9H9J2 332 aaKnown RBP17.13■□□□□ 0.33
LMNB1-203ENST00000460265 CTAGE9A4FU28 777 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 ENC1O14682 589 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CRKP46108 304 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CORO7P57737 925 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CCDC122Q5T0U0 273 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 TNFRSF25Q93038 417 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 DDX25Q9UHL0 483 aaKnown RBP17.12■□□□□ 0.33
LMNB1-203ENST00000460265 TFR2Q9UP52 801 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 FAN1Q9Y2M0 1017 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 AKR1B10O60218 316 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
LMNB1-203ENST00000460265 TCERG1LQ5VWI1 586 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CDC42EP5Q6NZY7 148 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 PDXDC2PQ6P474 469 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 ZFPM1Q8IX07 1006 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 SP8Q8IXZ3 490 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CHP1Q99653 195 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CRACR2AQ9BSW2 395 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 CHMP2AO43633 222 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 PMS1P54277 932 aaKnown RBP17.12■□□□□ 0.33
LMNB1-203ENST00000460265 RHBDL3P58872 404 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 SEPT2Q15019 361 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 SPA17Q15506 151 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 PRR16Q569H4 304 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 HERC4Q5GLZ8 1057 aaPredicted RBP17.12■□□□□ 0.33
LMNB1-203ENST00000460265 PSMB7Q99436 277 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 JADE2Q9NQC1 790 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 DONSONQ9NYP3 566 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 PKD2L1Q9P0L9 805 aa17.12■□□□□ 0.33
LMNB1-203ENST00000460265 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 SPDYE3A6NKU9 549 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 MFAP3LO75121 409 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CYP26C1Q6V0L0 522 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-203ENST00000460265 KCND1Q9NSA2 647 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 ATP6V0A2Q9Y487 856 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 BICDL2A1A5D9 508 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 UBXN2AP68543 259 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 ICA1Q05084 483 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 SHROOM1Q2M3G4 852 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-203ENST00000460265 SLC35G1Q2M3R5 365 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 DNAJC21Q5F1R6 531 aaKnown RBP17.11■□□□□ 0.33
LMNB1-203ENST00000460265 NT5DC1Q5TFE4 455 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CNNM4Q6P4Q7 775 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 TMTC1Q8IUR5 882 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 OR8K1Q8NGG5 319 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CNOT6LQ96LI5 555 aaKnown RBP17.11■□□□□ 0.33
LMNB1-203ENST00000460265 TSG101Q99816 390 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 KIAA1024Q9UPX6 916 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
LMNB1-203ENST00000460265 MEIS1O00470 390 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 NPR1P16066 1061 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 TAL1P17542 331 aaPredicted RBP17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 NCAPH2Q6IBW4 605 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CERS5Q8N5B7 392 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 CCDC42Q96M95 316 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 ZMYND12Q9H0C1 365 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 NLRC4Q9NPP4 1024 aa17.11■□□□□ 0.33
LMNB1-203ENST00000460265 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 RAD17O75943 681 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 ASPRV1Q53RT3 343 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 LARP4BQ92615 738 aaKnown RBP17.1■□□□□ 0.33
LMNB1-203ENST00000460265 GOLGA1Q92805 767 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 SPZ1Q9BXG8 430 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 TTC26A0AVF1 554 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 CFBP00751 764 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 GYPCP04921 128 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 EEF2P13639 858 aaKnown RBP17.1■□□□□ 0.33
LMNB1-203ENST00000460265 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
LMNB1-203ENST00000460265 AOC3Q16853 763 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 EFCAB13Q8IY85 973 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 CRAMP1Q96RY5 1269 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.1■□□□□ 0.33
LMNB1-203ENST00000460265 BCCIPQ9P287 314 aaKnown RBP eCLIP17.1■□□□□ 0.33
LMNB1-203ENST00000460265 EPN1Q9Y6I3 576 aaPredicted RBP17.1■□□□□ 0.33
LMNB1-203ENST00000460265 SPATA31A6Q5VVP1 1343 aa17.1■□□□□ 0.33
LMNB1-203ENST00000460265 IL1R1P14778 569 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 FAM114A1Q8IWE2 563 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 P2RX5Q93086 422 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 SRCAPQ6ZRS2 3230 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 CCDC174Q6PII3 467 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 TADA2BQ86TJ2 420 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 ANKRD13CQ8N6S4 541 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 ADGRG1Q9Y653 693 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 SLC37A4O43826 429 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 KLK7P49862 253 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 ANKRD40Q6AI12 368 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 HDXQ7Z353 690 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 TRIM9Q9C026 710 aa17.09■□□□□ 0.33
LMNB1-203ENST00000460265 C21orf2O43822 256 aa17.08■□□□□ 0.33
LMNB1-203ENST00000460265 N4BP1O75113 896 aaKnown RBP17.08■□□□□ 0.33
LMNB1-203ENST00000460265 SH3RF1Q7Z6J0 888 aa17.08■□□□□ 0.33
LMNB1-203ENST00000460265 OGFOD1Q8N543 542 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms