RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ARHGEF16Q5VV41 709 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 SLC39A5Q6ZMH5 540 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 Q6ZUG5 572 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 RAB11FIP4Q86YS3 637 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 FBXO16Q8IX29 292 aaPredicted RBP17.27■□□□□ 0.36
ATG4B-213ENST00000460211 SRBD1Q8N5C6 995 aaKnown RBP17.27■□□□□ 0.36
ATG4B-213ENST00000460211 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 IWS1Q96ST2 819 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 RMDN3Q96TC7 470 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 TSEN34Q9BSV6 310 aaKnown RBP17.27■□□□□ 0.36
ATG4B-213ENST00000460211 KATNBL1Q9H079 304 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 AP5M1Q9H0R1 490 aa17.27■□□□□ 0.36
ATG4B-213ENST00000460211 CCDC196A0A1B0GTZ2 297 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 GCOM1H8Y6P7 765 aaPredicted RBP17.26■□□□□ 0.35
ATG4B-213ENST00000460211 PLEKHA8P1O95397 391 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 POLR2MP0CAP2 368 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 ADCYAP1R1P41586 468 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 HSD17B4P51659 736 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 TMTC3Q6ZXV5 915 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 PCSK9Q8NBP7 692 aaKnown RBP17.26■□□□□ 0.35
ATG4B-213ENST00000460211 BADQ92934 168 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 TAAR1Q96RJ0 339 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 BRPF3Q9ULD4 1205 aa17.26■□□□□ 0.35
ATG4B-213ENST00000460211 SYNRGQ9UMZ2 1314 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 MOXD2PA6NHM9 499 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 GOLGA8AA7E2F4 631 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 GOLGA8BA8MQT2 603 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 ADAMTS4O75173 837 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 C6orf222P0C671 652 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-213ENST00000460211 CPA1P15085 419 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 EDNRBP24530 442 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 GJA9P57773 515 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 GHRHRQ02643 423 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 STXBP2Q15833 593 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 TRIM60Q495X7 471 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 TAPT1Q6NXT6 567 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 FBXL16Q8N461 479 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 CCDC82Q8N4S0 544 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 BRF1Q92994 677 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 CUL5Q93034 780 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 FERMT2Q96AC1 680 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-213ENST00000460211 CDX2Q99626 313 aaPredicted RBP17.25■□□□□ 0.35
ATG4B-213ENST00000460211 PHF24Q9UPV7 400 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 Q9Y3F1 56 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 CYP46A1Q9Y6A2 500 aa17.25■□□□□ 0.35
ATG4B-213ENST00000460211 BAZ2BQ9UIF8 2168 aaKnown RBP17.25■□□□□ 0.35
ATG4B-213ENST00000460211 ZEB2O60315 1214 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 CST5P28325 142 aaPredicted RBP17.24■□□□□ 0.35
ATG4B-213ENST00000460211 METAP2P50579 478 aaKnown RBP eCLIP17.24■□□□□ 0.35
ATG4B-213ENST00000460211 GNASQ5JWF2 1037 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 RUFY3Q7L099 469 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 CMTR1Q8N1G2 835 aaKnown RBP17.24■□□□□ 0.35
ATG4B-213ENST00000460211 KLHDC9Q8NEP7 349 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 SCFD2Q8WU76 684 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 WDR11Q9BZH6 1224 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 TM6SF1Q9BZW5 370 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 UPF3AQ9H1J1 476 aaKnown RBP17.24■□□□□ 0.35
ATG4B-213ENST00000460211 ZSWIM6Q9HCJ5 1215 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 PDGFCQ9NRA1 345 aa17.24■□□□□ 0.35
ATG4B-213ENST00000460211 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 OPLAHO14841 1288 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 NKRFO15226 690 aaKnown RBP eCLIP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 SMPD1P17405 629 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 EIF2AK2P19525 551 aaKnown RBP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 ACLYP53396 1101 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 APOBRQ0VD83 1088 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 KCNA10Q16322 511 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 DUSP28Q4G0W2 176 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 TLK2Q86UE8 772 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 FCHSD1Q86WN1 690 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 SEMA6BQ9H3T3 888 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 PDLIM7Q9NR12 457 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 COL20A1Q9P218 1284 aa17.23■□□□□ 0.35
ATG4B-213ENST00000460211 GNEQ9Y223 722 aaKnown RBP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 DDX49Q9Y6V7 483 aaKnown RBP17.23■□□□□ 0.35
ATG4B-213ENST00000460211 MCM3APO60318 1980 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 VCANP13611 3396 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 MYH6P13533 1939 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 RBM47A0AV96 593 aaKnown RBP17.22■□□□□ 0.35
ATG4B-213ENST00000460211 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
ATG4B-213ENST00000460211 NR3C2P08235 984 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 TTLL4Q14679 1199 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-213ENST00000460211 MAFAQ8NHW3 353 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-213ENST00000460211 SMARCC2Q8TAQ2 1214 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 MYLIPQ8WY64 445 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 VTI1AQ96AJ9 217 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 GLT1D1Q96MS3 346 aa17.22■□□□□ 0.35
ATG4B-213ENST00000460211 TRIM43BA6NCK2 446 aa17.21■□□□□ 0.35
ATG4B-213ENST00000460211 ADCY6O43306 1168 aa17.21■□□□□ 0.35
ATG4B-213ENST00000460211 ANAPC15P60006 121 aa17.21■□□□□ 0.35
ATG4B-213ENST00000460211 NKX3-2P78367 333 aa17.21■□□□□ 0.35
ATG4B-213ENST00000460211 HEATR3Q7Z4Q2 680 aa17.21■□□□□ 0.35
ATG4B-213ENST00000460211 TRIM43Q96BQ3 446 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-213ENST00000460211 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms