RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 RASEFQ8IZ41 740 aa19.13■□□□□ 0.65
SHANK2-213ENST00000460048 CTCFLQ8NI51 663 aaPredicted RBP19.13■□□□□ 0.65
SHANK2-213ENST00000460048 IWS1Q96ST2 819 aa19.13■□□□□ 0.65
SHANK2-213ENST00000460048 RMDN3Q96TC7 470 aa19.13■□□□□ 0.65
SHANK2-213ENST00000460048 SPZ1Q9BXG8 430 aa19.13■□□□□ 0.65
SHANK2-213ENST00000460048 SCN10AQ9Y5Y9 1956 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 MROH7Q68CQ1 1323 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 CCDC69A6NI79 296 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 ARVCFO00192 962 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 SOX1O00570 391 aaPredicted RBP19.12■□□□□ 0.65
SHANK2-213ENST00000460048 KIAA0355O15063 1070 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 NKRFO15226 690 aaKnown RBP eCLIP19.12■□□□□ 0.652e-7■■■■■ 36.9
SHANK2-213ENST00000460048 CABYRO75952 493 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 KIF5BP33176 963 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 EXOSC10Q01780 885 aaKnown RBP19.12■□□□□ 0.65
SHANK2-213ENST00000460048 CXCL17Q6UXB2 119 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 NFXL1Q6ZNB6 911 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 SGMS1Q86VZ5 419 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 SCFD2Q8WU76 684 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 NEK1Q96PY6 1258 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 LRRC2Q9BYS8 371 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 PXMP2Q9NR77 195 aa19.12■□□□□ 0.65
SHANK2-213ENST00000460048 DCDC2CA8MYV0 355 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 ZEB2O60315 1214 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 ARIH2O95376 493 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 ITGB8P26012 769 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 PPP2R5BQ15173 497 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 ADCK5Q3MIX3 580 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 ARHGEF16Q5VV41 709 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 CCDC62Q6P9F0 684 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 SLC43A3Q8NBI5 491 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 BADQ92934 168 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 KCNB2Q92953 911 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 VTI1AQ96AJ9 217 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 LZTS2Q9BRK4 669 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 LAMA3Q16787 3333 aa19.11■□□□□ 0.65
SHANK2-213ENST00000460048 GRIN2DO15399 1336 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 PLEKHA8P1O95397 391 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 CALM1P0DP23 149 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 CALM2P0DP24 149 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 CALM3P0DP25 149 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 EIF2AK2P19525 551 aaKnown RBP19.1■□□□□ 0.65
SHANK2-213ENST00000460048 GNAQP50148 359 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 STXBP2Q15833 593 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 LRIT3Q3SXY7 679 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 FAM126BQ8IXS8 530 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 SRBD1Q8N5C6 995 aaKnown RBP19.1■□□□□ 0.65
SHANK2-213ENST00000460048 OR6J1Q8NGC5 347 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 COPS5Q92905 334 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 TMEM39AQ9NV64 488 aa19.1■□□□□ 0.65
SHANK2-213ENST00000460048 SZT2Q5T011 3432 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 NR3C2P08235 984 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 TXNP10599 105 aaKnown RBP19.09■□□□□ 0.65
SHANK2-213ENST00000460048 RXRAP19793 462 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 ITGA7Q13683 1181 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 KRT32Q14532 448 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 TTLL4Q14679 1199 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 DHX32Q7L7V1 743 aaKnown RBP19.09■□□□□ 0.65
SHANK2-213ENST00000460048 TBX21Q9UL17 535 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 SLC12A7Q9Y666 1083 aa19.09■□□□□ 0.65
SHANK2-213ENST00000460048 GCOM1H8Y6P7 765 aaPredicted RBP19.08■□□□□ 0.64
SHANK2-213ENST00000460048 EIF3JO75822 258 aaKnown RBP19.08■□□□□ 0.64
SHANK2-213ENST00000460048 CD4P01730 458 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 POLR2MP0CAP2 368 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 HOXA13P31271 388 aaPredicted RBP19.08■□□□□ 0.64
SHANK2-213ENST00000460048 CPT1AP50416 773 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 ERICH6BQ5W0A0 696 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 PIBF1Q8WXW3 757 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 RRP36Q96EU6 259 aaKnown RBP19.08■□□□□ 0.64
SHANK2-213ENST00000460048 LRCH3Q96II8 777 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 PDCD2LQ9BRP1 358 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 SEZ6LQ9BYH1 1024 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 POLR3EQ9NVU0 708 aa19.08■□□□□ 0.64
SHANK2-213ENST00000460048 A6NJR5 290 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 RAG1P15918 1043 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 HSPA4P34932 840 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 PURAQ00577 322 aaKnown RBP19.07■□□□□ 0.64
SHANK2-213ENST00000460048 PGM5Q15124 567 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 APOA5Q6Q788 366 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 SEPT14Q6ZU15 432 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 RAB11FIP4Q86YS3 637 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 CMTR1Q8N1G2 835 aaKnown RBP19.07■□□□□ 0.64
SHANK2-213ENST00000460048 FANCBQ8NB91 859 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 TCEANC2Q96MN5 208 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
SHANK2-213ENST00000460048 TLR3O15455 904 aaKnown RBP19.06■□□□□ 0.64
SHANK2-213ENST00000460048 RGS20O76081 388 aa19.06■□□□□ 0.64
SHANK2-213ENST00000460048 PSMC6P62333 389 aa19.06■□□□□ 0.64
SHANK2-213ENST00000460048 LY6KQ17RY6 165 aa19.06■□□□□ 0.64
SHANK2-213ENST00000460048 TMTC3Q6ZXV5 915 aa19.06■□□□□ 0.64
SHANK2-213ENST00000460048 VSIG10LQ86VR7 867 aa19.06■□□□□ 0.64
SHANK2-213ENST00000460048 BRPF3Q9ULD4 1205 aa19.06■□□□□ 0.64
SHANK2-213ENST00000460048 DOCK5Q9H7D0 1870 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 FRMPD4Q14CM0 1322 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 TIMP1P01033 207 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 MYL3P08590 195 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 HMGB1P09429 215 aaKnown RBP19.05■□□□□ 0.64
SHANK2-213ENST00000460048 ARHGAP1Q07960 439 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 SHHQ15465 462 aa19.05■□□□□ 0.64
SHANK2-213ENST00000460048 BRDTQ58F21 947 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms