RNA–Protein interactions for RNA: ENST00000459903.5

RABGAP1-206, Transcript of RAB GTPase activating protein 1, human

TSL 4

Gene RABGAP1, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1-206	ENST00000459903	HEATR3	Q7Z4Q2	680 aa		27.61	■■■□□ 2.01
RABGAP1-206	ENST00000459903	LENG1	Q96BZ8	264 aa	Predicted RBP	27.61	■■■□□ 2.01
RABGAP1-206	ENST00000459903	SPC25	Q9HBM1	224 aa		27.61	■■■□□ 2.01
RABGAP1-206	ENST00000459903	GTF3C3	Q9Y5Q9	886 aa		27.61	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PIK3CD	O00329	1044 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PGK1	P00558	417 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	ADCYAP1R1	P41586	468 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	STXBP2	Q15833	593 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PPP1R18	Q6NYC8	613 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	TEX2	Q8IWB9	1127 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	SYNRG	Q9UMZ2	1314 aa		27.6	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PDE4DIP	Q5VU43	2346 aa		27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	RBM47	A0AV96	593 aa	Known RBP	27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	ADCY6	O43306	1168 aa		27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	ADAMTS4	O75173	837 aa		27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	UPF3A	Q9H1J1	476 aa	Known RBP	27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PSTPIP2	Q9H939	334 aa		27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PDGFC	Q9NRA1	345 aa		27.59	■■■□□ 2.01
RABGAP1-206	ENST00000459903	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	MYCN	P04198	464 aa	Predicted RBP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	NR3C2	P08235	984 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	EIF2AK2	P19525	551 aa	Known RBP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	GJA9	P57773	515 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	NTRK3	Q16288	839 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	WWC2	Q6AWC2	1192 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	NOL8	Q76FK4	1167 aa	Known RBP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	SMARCC2	Q8TAQ2	1214 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	SCFD2	Q8WU76	684 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	PDCD2L	Q9BRP1	358 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	TSEN34	Q9BSV6	310 aa	Known RBP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	GNE	Q9Y223	722 aa	Known RBP	27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903		Q9Y3F1	56 aa		27.58	■■■□□ 2.01
RABGAP1-206	ENST00000459903	MEIS2	O14770	477 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	PRPF3	O43395	683 aa	Known RBP	27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	IFNAR1	P17181	557 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	SMPD1	P17405	629 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	CST5	P28325	142 aa	Predicted RBP	27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	NKX3-2	P78367	333 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	CCT2	P78371	535 aa	Known RBP	27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	AKAP17A	Q02040	695 aa	Known RBP	27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	DUSP28	Q4G0W2	176 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	FCHSD1	Q86WN1	690 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	RNF26	Q9BY78	433 aa	Predicted RBP	27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	WDR11	Q9BZH6	1224 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	BARHL2	Q9NY43	387 aa		27.57	■■■□□ 2
RABGAP1-206	ENST00000459903	EIF3J	O75822	258 aa	Known RBP	27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	NAPA	P54920	295 aa		27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	PFKFB3	Q16875	520 aa	Predicted RBP	27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	USP17L6P	Q6QN14	398 aa		27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	KLHDC9	Q8NEP7	349 aa		27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	DPF3	Q92784	378 aa		27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	SENP6	Q9GZR1	1112 aa	Predicted RBP	27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	NCOA5	Q9HCD5	579 aa	Known RBP	27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	PHF24	Q9UPV7	400 aa		27.56	■■■□□ 2
RABGAP1-206	ENST00000459903	CPLX1	O14810	134 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	NKRF	O15226	690 aa	Known RBP eCLIP	27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	C6orf222	P0C671	652 aa	Predicted RBP	27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	SCG2	P13521	617 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	NEK4	P51957	841 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	TTLL4	Q14679	1199 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	PGM5	Q15124	567 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	CPLX2	Q6PUV4	134 aa	Known RBP	27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	TLK2	Q86UE8	772 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	PCSK9	Q8NBP7	692 aa	Known RBP	27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	LARP6	Q9BRS8	491 aa	Known RBP	27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	AP5M1	Q9H0R1	490 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	GLT8D2	Q9H1C3	349 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	FRMPD4	Q14CM0	1322 aa		27.55	■■■□□ 2
RABGAP1-206	ENST00000459903	STXBP3	O00186	592 aa		27.54	■■■□□ 2
RABGAP1-206	ENST00000459903	CCND2	P30279	289 aa		27.54	■■■□□ 2
RABGAP1-206	ENST00000459903	AK2	P54819	239 aa		27.54	■■■□□ 2
RABGAP1-206	ENST00000459903	VSIG10L	Q86VR7	867 aa		27.54	■■■□□ 2
RABGAP1-206	ENST00000459903	C22orf23	Q9BZE7	217 aa		27.54	■■■□□ 2
RABGAP1-206	ENST00000459903	UPF2	Q9HAU5	1272 aa	Known RBP	27.54	■■■□□ 2
RABGAP1-206	ENST00000459903	MOXD2P	A6NHM9	499 aa		27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	CCSAP	Q6IQ19	270 aa	Predicted RBP	27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	TRIM22	Q8IYM9	498 aa		27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	PHKB	Q93100	1093 aa		27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	SLK	Q9H2G2	1235 aa	Predicted RBP	27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	RIC8A	Q9NPQ8	531 aa		27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	TPCN1	Q9ULQ1	816 aa		27.53	■■■□□ 2
RABGAP1-206	ENST00000459903	EVI5	O60447	810 aa		27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	STAM2	O75886	525 aa		27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	MYCL	P12524	364 aa	Predicted RBP	27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	RBM25	P49756	843 aa	Known RBP	27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	STK3	Q13188	491 aa		27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	TYW1B	Q6NUM6	668 aa		27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	SEPT14	Q6ZU15	432 aa		27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	SLC26A6	Q9BXS9	759 aa		27.52	■■■□□ 2
RABGAP1-206	ENST00000459903	MYADML2	A6NDP7	307 aa		27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	DYNC1LI2	O43237	492 aa	Predicted RBP	27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	PFKFB2	O60825	505 aa		27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	TXN	P10599	105 aa	Known RBP	27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	ADCY7	P51828	1080 aa		27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	KCNA10	Q16322	511 aa		27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	PKN1	Q16512	942 aa		27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	GNAS	Q5JWF2	1037 aa		27.51	■■□□□ 1.99
RABGAP1-206	ENST00000459903	XRRA1	Q6P2D8	792 aa		27.51	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms