RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 EPB41P11171 864 aaKnown RBP9.47□□□□□ -0.89
VPS50-208ENST00000458707 IDEP14735 1019 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 CALRP27797 417 aaKnown RBP9.47□□□□□ -0.89
VPS50-208ENST00000458707 TNFRSF8P28908 595 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
VPS50-208ENST00000458707 PPFIA1Q13136 1202 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 COBLL1Q53SF7 1204 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 CCDC70Q6NSX1 233 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 TADA2BQ86TJ2 420 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 BLIDQ8IZY5 108 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 TRIM58Q8NG06 486 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 RIN2Q8WYP3 895 aaPredicted RBP9.47□□□□□ -0.89
VPS50-208ENST00000458707 TRIM47Q96LD4 638 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 CUEDC2Q9H467 287 aa9.47□□□□□ -0.89
VPS50-208ENST00000458707 CYP2D7A0A087X1C5 515 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 BICDL2A1A5D9 508 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 GOLGA6CA6NDK9 693 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
VPS50-208ENST00000458707 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
VPS50-208ENST00000458707 B4DLN1 442 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 GOLGA8KD6RF30 607 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 LAD1O00515 517 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 ZNF185O15231 689 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 GOLGA6DP0CG33 693 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 TRIM21P19474 475 aaKnown RBP9.46□□□□□ -0.9
VPS50-208ENST00000458707 CCNE1P24864 410 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 IGHMBP2P38935 993 aaKnown RBP9.46□□□□□ -0.9
VPS50-208ENST00000458707 PRPHP41219 470 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 PPP1R2P41236 205 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 IRAK1P51617 712 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 CHRNDQ07001 517 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 KIF5AQ12840 1032 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 C11orf91Q3C1V1 193 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 CCDC152Q4G0S7 254 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 MIIPQ5JXC2 388 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 SUSD4Q5VX71 490 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 RPAINQ86UA6 219 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 FAM114A1Q8IWE2 563 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 SUGP1Q8IWZ8 645 aaKnown RBP9.46□□□□□ -0.9
VPS50-208ENST00000458707 CAGE1Q8TC20 777 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 BORCS6Q96GS4 357 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 KAT14Q9H8E8 782 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 GOLGA6AQ9NYA3 693 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 GRIN2DO15399 1336 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 FAM205AQ6ZU69 1335 aa9.46□□□□□ -0.9
VPS50-208ENST00000458707 ATXN2Q99700 1313 aaKnown RBP9.46□□□□□ -0.9
VPS50-208ENST00000458707 A6NNZ2 444 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 PPP1R12AO14974 1030 aaPredicted RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 ZNF263O14978 683 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 ZMYND10O75800 440 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 VEGFAP15692 232 aaPredicted RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 SKOR1P84550 965 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 C2orf54Q08AI8 447 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 TBC1D8BQ0IIM8 1120 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 TUBB8Q3ZCM7 444 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 DTHD1Q6ZMT9 781 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 GSPT2Q8IYD1 628 aaKnown RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 CSGALNACT2Q8N6G5 542 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 DAGLBQ8NCG7 672 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 P2RX5Q93086 422 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 CAVIN3Q969G5 261 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 FAM210AQ96ND0 272 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 PLEKHA4Q9H4M7 779 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 SH2D4AQ9H788 454 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 PCDHA4Q9UN74 947 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 PLAGL2Q9UPG8 496 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 DUSP10Q9Y6W6 482 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 KLHL33A6NCF5 533 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 EXOC5O00471 708 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 EIF3HO15372 352 aaKnown RBP eCLIP9.45□□□□□ -0.9
VPS50-208ENST00000458707 OPA1O60313 960 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 TACC1O75410 805 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 KIF5BP33176 963 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 NT5C2P49902 561 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 EPHB4P54760 987 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 DYNLL1P63167 89 aaKnown RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 ALS2CLQ60I27 953 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 EMBQ6PCB8 327 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 BRINP3Q76B58 766 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 ZNF384Q8TF68 577 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 MS4A4AQ96JQ5 239 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
VPS50-208ENST00000458707 JADE2Q9NQC1 790 aa9.45□□□□□ -0.9
VPS50-208ENST00000458707 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 FLT1P17948 1338 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 PES1O00541 588 aaKnown RBP9.44□□□□□ -0.9
VPS50-208ENST00000458707 PJA2O43164 708 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 USO1O60763 962 aaKnown RBP9.44□□□□□ -0.9
VPS50-208ENST00000458707 TCP1P17987 556 aaKnown RBP9.44□□□□□ -0.9
VPS50-208ENST00000458707 UBA7P41226 1012 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 KLK7P49862 253 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 NNTQ13423 1086 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 SPA17Q15506 151 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 PARP10Q53GL7 1025 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 ANKRD40Q6AI12 368 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 GALNT17Q6IS24 598 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 RCSD1Q6JBY9 416 aa9.44□□□□□ -0.9
VPS50-208ENST00000458707 SPATA4Q8NEY3 305 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms