RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 CDK5RAP3Q96JB5 506 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 NUP88Q99567 741 aaPredicted RBP18.66■□□□□ 0.58
CCDC43-202ENST00000457422 LRRC27Q9C0I9 530 aa18.66■□□□□ 0.58
CCDC43-202ENST00000457422 MYMKA6NI61 221 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 URI1O94763 535 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-202ENST00000457422 FCER1AP12319 257 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 DNM2P50570 870 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 MCM6Q14566 821 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 CYP26C1Q6V0L0 522 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 FAM114A1Q8IWE2 563 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 KIAA0895Q8NCT3 520 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 SNX29Q8TEQ0 813 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 RAD54LQ92698 747 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 HAS1Q92839 578 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 RNF225M0QZC1 329 aaPredicted RBP18.65■□□□□ 0.58
CCDC43-202ENST00000457422 ENTPD3O75355 529 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 ERVK-24P63145 666 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 MAP3K9P80192 1104 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 ICA1Q05084 483 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 ANKRD40Q6AI12 368 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 CC2D2BQ6DHV5 1058 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 SIAH1Q8IUQ4 282 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 GMCL1P1Q8NEA9 526 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 FEZ1Q99689 392 aa18.65■□□□□ 0.58
CCDC43-202ENST00000457422 GDF11O95390 407 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 KRT9P35527 623 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 CDC37Q16543 378 aaPredicted RBP18.64■□□□□ 0.57
CCDC43-202ENST00000457422 HYIQ5T013 277 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 CENPPQ6IPU0 288 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 HPS3Q969F9 1004 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 NUDT12Q9BQG2 462 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 TDRD3Q9H7E2 651 aaKnown RBP18.64■□□□□ 0.57
CCDC43-202ENST00000457422 SLC26A4O43511 780 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 SUPT20HQ8NEM7 779 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 TUBGCP2Q9BSJ2 902 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 PCDHA1Q9Y5I3 950 aa18.64■□□□□ 0.57
CCDC43-202ENST00000457422 USP11P51784 963 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 EHHADHQ08426 723 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 MOXD1Q6UVY6 613 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 GJA10Q969M2 543 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 GMCL1Q96IK5 515 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 CNOT6LQ96LI5 555 aaKnown RBP18.63■□□□□ 0.57
CCDC43-202ENST00000457422 MBOAT7Q96N66 472 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 DNAJC7Q99615 494 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 CAPN11Q9UMQ6 739 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 KDM3AQ9Y4C1 1321 aa18.63■□□□□ 0.57
CCDC43-202ENST00000457422 CYP3A7-CYP3A51PA0A087WV96 503 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 TTC26A0AVF1 554 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 TADA3O75528 432 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 CYP3A7P24462 503 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 RXRBP28702 533 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 AP3B2Q13367 1082 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 ABCB5Q2M3G0 1257 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 ERCC6LQ2NKX8 1250 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 MCTP2Q6DN12 878 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 FOXR2Q6PJQ5 311 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 GUF1Q8N442 669 aaKnown RBP18.62■□□□□ 0.57
CCDC43-202ENST00000457422 SYNPO2Q9UMS6 1093 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 MRFAP1Q9Y605 127 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 A0A0U1RQJ8 604 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 YDJCA8MPS7 323 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 EFCAB8A8MWE9 144 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 PES1O00541 588 aaKnown RBP18.62■□□□□ 0.57
CCDC43-202ENST00000457422 PSMD2Q13200 908 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 KCNK18Q7Z418 384 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 RETREG2Q8NC44 543 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 OR8K1Q8NGG5 319 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 ATRIPQ8WXE1 791 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 ANO3Q9BYT9 981 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 TTYH3Q9C0H2 523 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 SEMA6BQ9H3T3 888 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 SLC39A2Q9NP94 309 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 KCNMB3Q9NPA1 279 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 PCDHA12Q9UN75 941 aa18.62■□□□□ 0.57
CCDC43-202ENST00000457422 ABCB11O95342 1321 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 F5H6K3 240 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 KLRC3Q07444 240 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 SLC15A2Q16348 729 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 FBXO38Q6PIJ6 1188 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 DYMQ7RTS9 669 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 MNS1Q8NEH6 495 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 CRYGNQ8WXF5 182 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 NUP58Q9BVL2 599 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 NT5C3AQ9H0P0 336 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 LUC7L2Q9Y383 392 aaKnown RBP18.61■□□□□ 0.57
CCDC43-202ENST00000457422 B4DLN1 442 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 MEIS2O14770 477 aa18.61■□□□□ 0.57
CCDC43-202ENST00000457422 KIF5CO60282 957 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms