RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 CRKP46108 304 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 ZYXQ15942 572 aaKnown RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 PFKFB3Q16875 520 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 BLIDQ8IZY5 108 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 MLKLQ8NB16 471 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 GJA10Q969M2 543 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 ZNF277Q9NRM2 450 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 STK32BQ9NY57 414 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 CTNND2Q9UQB3 1225 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 TCP10L2B9ZVM9 353 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 NDUFAB1O14561 156 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 AARSP49588 968 aaKnown RBP eCLIP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 PPARDQ03181 441 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 ACTN3Q08043 901 aaPredicted RBP15.1■□□□□ 0.01
TOP3B-213ENST00000457179 SLC15A2Q16348 729 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 MAP9Q49MG5 647 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 COG1Q8WTW3 980 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 GUCA1BQ9UMX6 200 aa15.1■□□□□ 0.01
TOP3B-213ENST00000457179 RGL2O15211 777 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 ELF1P32519 619 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 TRIM10Q9UDY6 481 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 GOLGA6BA6NDN3 693 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 SMCO2A6NFE2 343 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 FGRP09769 529 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 MYBL2P10244 700 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 PAX7P23759 505 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 CASP14P31944 242 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 NEDD9Q14511 834 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 RNF187Q5TA31 235 aaPredicted RBP15.09■□□□□ 0.01
TOP3B-213ENST00000457179 SOGA3Q5TF21 947 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 CEP57Q86XR8 500 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 PRPF38AQ8NAV1 312 aaKnown RBP15.09■□□□□ 0.01
TOP3B-213ENST00000457179 NUP88Q99567 741 aaPredicted RBP15.09■□□□□ 0.01
TOP3B-213ENST00000457179 TMEM260Q9NX78 707 aa15.09■□□□□ 0.01
TOP3B-213ENST00000457179 ZEB2O60315 1214 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 CCNT1O60563 726 aaKnown RBP15.08■□□□□ 0.01
TOP3B-213ENST00000457179 PCP11498 1178 aaKnown RBP15.08■□□□□ 0.01
TOP3B-213ENST00000457179 DPYDQ12882 1025 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 NPY5RQ15761 445 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 KIRREL3Q8IZU9 778 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 SLF1Q9BQI6 1058 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 DACH1Q9UI36 760 aa15.08■□□□□ 0.01
TOP3B-213ENST00000457179 DDTLA6NHG4 134 aaPredicted RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 SSBP05455 408 aaKnown RBP eCLIP15.08■□□□□ 0
TOP3B-213ENST00000457179 SARSP49591 514 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 RRAGBQ5VZM2 374 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 APOBEC3HQ6NTF7 200 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 WDR93Q6P2C0 686 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 ZKSCAN4Q969J2 545 aaPredicted RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 SELENOOQ9BVL4 669 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 VIPAS39Q9H9C1 493 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 SYNRGQ9UMZ2 1314 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 THSD7AQ9UPZ6 1657 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 EIF3HO15372 352 aaKnown RBP eCLIP15.08■□□□□ 02e-6■■□□□ 11.9
TOP3B-213ENST00000457179 ERCC3P19447 782 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 MRPS25P82663 173 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 PDCLQ13371 301 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 CUL4BQ13620 913 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 PPP2R5BQ15173 497 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 C16orf86Q6ZW13 317 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 CAGE1Q8TC20 777 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 ENOX1Q8TC92 643 aaKnown RBP15.08■□□□□ 0
TOP3B-213ENST00000457179 VPS16Q9H269 839 aa15.08■□□□□ 0
TOP3B-213ENST00000457179 SHOX2O60902 331 aaPredicted RBP15.07■□□□□ 0
TOP3B-213ENST00000457179 HLA-DOAP06340 250 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 ATP1A2P50993 1020 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 USP14P54578 494 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 PPFIA1Q13136 1202 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 MMS19Q96T76 1030 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 AGPSO00116 658 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TULP1O00294 542 aaPredicted RBP15.07■□□□□ 0
TOP3B-213ENST00000457179 MARCH6O60337 910 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TNNI2P48788 182 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 MIGA2Q7L4E1 593 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 LARGE2Q8N3Y3 721 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 MIEF2Q96C03 454 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 PANX2Q96RD6 677 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TMEM60Q9H2L4 133 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 ODF2LQ9ULJ1 636 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 TFR2Q9UP52 801 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 NHSQ6T4R5 1651 aa15.07■□□□□ 0
TOP3B-213ENST00000457179 PDS5AQ29RF7 1337 aaKnown RBP15.07■□□□□ 0
TOP3B-213ENST00000457179 TUBBP07437 444 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 ZNF18P17022 549 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 TUBB4BP68371 445 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 UBE2SQ16763 222 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 NAIF1Q69YI7 327 aaPredicted RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 KANK3Q6NY19 840 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 CCDC84Q86UT8 332 aaPredicted RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 ZNF579Q8NAF0 562 aaKnown RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 RRP36Q96EU6 259 aaKnown RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 ZC3H4Q9UPT8 1303 aaKnown RBP15.06■□□□□ 0
TOP3B-213ENST00000457179 BCORQ6W2J9 1755 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 CHD4Q14839 1912 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 IL17AQ16552 155 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 EGFL6Q8IUX8 553 aa15.06■□□□□ 0
TOP3B-213ENST00000457179 NEDD1Q8NHV4 660 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms