RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 SCFD2Q8WU76 684 aa18.8■□□□□ 0.6
CPSF6-203ENST00000456847 SLC12A7Q9Y666 1083 aa18.8■□□□□ 0.6
CPSF6-203ENST00000456847 DCDC2CA8MYV0 355 aa18.79■□□□□ 0.6
CPSF6-203ENST00000456847 EIF2AK2P19525 551 aaKnown RBP18.79■□□□□ 0.6
CPSF6-203ENST00000456847 GNAQP50148 359 aa18.79■□□□□ 0.6
CPSF6-203ENST00000456847 NKX3-2P78367 333 aa18.79■□□□□ 0.6
CPSF6-203ENST00000456847 RRP36Q96EU6 259 aaKnown RBP18.79■□□□□ 0.6
CPSF6-203ENST00000456847 PPP4R2Q9NY27 417 aa18.79■□□□□ 0.6
CPSF6-203ENST00000456847 SEC63Q9UGP8 760 aaKnown RBP18.79■□□□□ 0.6
CPSF6-203ENST00000456847 MROH7Q68CQ1 1323 aa18.79■□□□□ 0.6
CPSF6-203ENST00000456847 RBM47A0AV96 593 aaKnown RBP18.78■□□□□ 0.6
CPSF6-203ENST00000456847 CXCL17Q6UXB2 119 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 SYNE3Q6ZMZ3 975 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 LZTS2Q9BRK4 669 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 SPZ1Q9BXG8 430 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 OPLAHO14841 1288 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 HSD17B4P51659 736 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 STXBP2Q15833 593 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 SH3RF1Q7Z6J0 888 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 MICU3Q86XE3 530 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 RASEFQ8IZ41 740 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 TDHQ8IZJ6 230 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 IWS1Q96ST2 819 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 PXMP2Q9NR77 195 aa18.78■□□□□ 0.6
CPSF6-203ENST00000456847 NKRFO15226 690 aaKnown RBP eCLIP18.77■□□□□ 0.66e-9■□□□□ 11.2
CPSF6-203ENST00000456847 CABYRO75952 493 aa18.77■□□□□ 0.6
CPSF6-203ENST00000456847 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
CPSF6-203ENST00000456847 HOXA13P31271 388 aaPredicted RBP18.77■□□□□ 0.6
CPSF6-203ENST00000456847 TTLL4Q14679 1199 aa18.77■□□□□ 0.6
CPSF6-203ENST00000456847 SEPT14Q6ZU15 432 aa18.77■□□□□ 0.6
CPSF6-203ENST00000456847 TCEANC2Q96MN5 208 aa18.77■□□□□ 0.6
CPSF6-203ENST00000456847 TMEM39AQ9NV64 488 aa18.77■□□□□ 0.6
CPSF6-203ENST00000456847 MAP3K20Q9NYL2 800 aaKnown RBP18.77■□□□□ 0.6
CPSF6-203ENST00000456847 TRIM43BA6NCK2 446 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 GCOM1H8Y6P7 765 aaPredicted RBP18.76■□□□□ 0.59
CPSF6-203ENST00000456847 ARVCFO00192 962 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 REC8O95072 547 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 POLR2MP0CAP2 368 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 TXNP10599 105 aaKnown RBP18.76■□□□□ 0.59
CPSF6-203ENST00000456847 CPT1AP50416 773 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 ADCK5Q3MIX3 580 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 BRDTQ58F21 947 aaPredicted RBP18.76■□□□□ 0.59
CPSF6-203ENST00000456847 DHX32Q7L7V1 743 aaKnown RBP18.76■□□□□ 0.59
CPSF6-203ENST00000456847 ANKRD33Q7Z3H0 272 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 SAMD3Q8N6K7 520 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 TRIM43Q96BQ3 446 aaPredicted RBP18.76■□□□□ 0.59
CPSF6-203ENST00000456847 TLR3O15455 904 aaKnown RBP18.76■□□□□ 0.59
CPSF6-203ENST00000456847 MYL3P08590 195 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 GHRHRQ02643 423 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 TSGA10IPQ3SY00 556 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 BADQ92934 168 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 TOX2Q96NM4 488 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 POLR3EQ9NVU0 708 aa18.76■□□□□ 0.59
CPSF6-203ENST00000456847 MYCLP12524 364 aaPredicted RBP18.75■□□□□ 0.59
CPSF6-203ENST00000456847 RAG1P15918 1043 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 SMARCA1P28370 1054 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 FGD1P98174 961 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 SGMS1Q86VZ5 419 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 FCHSD1Q86WN1 690 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 CMTR1Q8N1G2 835 aaKnown RBP18.75■□□□□ 0.59
CPSF6-203ENST00000456847 COPS5Q92905 334 aa18.75■□□□□ 0.59
CPSF6-203ENST00000456847 NR3C2P08235 984 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
CPSF6-203ENST00000456847 FAAP100Q0VG06 881 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 SRBD1Q8N5C6 995 aaKnown RBP18.74■□□□□ 0.59
CPSF6-203ENST00000456847 NAP1L2Q9ULW6 460 aaPredicted RBP18.74■□□□□ 0.59
CPSF6-203ENST00000456847 KIAA0355O15063 1070 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 ARIH2O95376 493 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 ITGA7Q13683 1181 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 APOA5Q6Q788 366 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 FANCBQ8NB91 859 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 JAKMIP1Q96N16 626 aaKnown RBP18.74■□□□□ 0.59
CPSF6-203ENST00000456847 PDCD2LQ9BRP1 358 aa18.74■□□□□ 0.59
CPSF6-203ENST00000456847 EIF3JO75822 258 aaKnown RBP18.73■□□□□ 0.59
CPSF6-203ENST00000456847 HSPA4P34932 840 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 CDK7P50613 346 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 PSMC6P62333 389 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 EXOSC10Q01780 885 aaKnown RBP18.73■□□□□ 0.59
CPSF6-203ENST00000456847 TMTC3Q6ZXV5 915 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 CCDC82Q8N4S0 544 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 CUL5Q93034 780 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 MRVI1Q9Y6F6 885 aa18.73■□□□□ 0.59
CPSF6-203ENST00000456847 ZBTB43O43298 467 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 GH1P01241 217 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 PGM5Q15124 567 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 LY6KQ17RY6 165 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 FAM126BQ8IXS8 530 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 SMARCC2Q8TAQ2 1214 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 RBM28Q9NW13 759 aaKnown RBP18.72■□□□□ 0.59
CPSF6-203ENST00000456847 MYH7BA7E2Y1 1941 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 KLF18A0A0U1RQI7 1052 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 SOX1O00570 391 aaPredicted RBP18.72■□□□□ 0.59
CPSF6-203ENST00000456847 CCND2P30279 289 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 RTN1Q16799 776 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 BLOC1S2Q6QNY1 142 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 MTG1Q9BT17 334 aaPredicted RBP18.72■□□□□ 0.59
CPSF6-203ENST00000456847 SNX14Q9Y5W7 946 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 DNAH12Q6ZR08 3092 aa18.72■□□□□ 0.59
CPSF6-203ENST00000456847 hCG_1642624A0A1W2PR95 340 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms