RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SMPD1P17405 629 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 TRIM60Q495X7 471 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 IQSEC1Q6DN90 963 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 TBC1D5Q92609 795 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 RRP36Q96EU6 259 aaKnown RBP20.07■□□□□ 0.8
USP39-208ENST00000455732 SPC25Q9HBM1 224 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 BRPF3Q9ULD4 1205 aa20.07■□□□□ 0.8
USP39-208ENST00000455732 B4DLN1 442 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 CPA1P15085 419 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 CASTP20810 708 aaKnown RBP20.06■□□□□ 0.8
USP39-208ENST00000455732 MRPL12P52815 198 aaKnown RBP20.06■□□□□ 0.8
USP39-208ENST00000455732 TMEM63BQ5T3F8 832 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 RAB11FIP4Q86YS3 637 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 PCSK9Q8NBP7 692 aaKnown RBP20.06■□□□□ 0.8
USP39-208ENST00000455732 TM6SF1Q9BZW5 370 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 COL20A1Q9P218 1284 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 SEC63Q9UGP8 760 aaKnown RBP20.06■□□□□ 0.8
USP39-208ENST00000455732 NID2Q14112 1375 aa20.06■□□□□ 0.8
USP39-208ENST00000455732 KLF18A0A0U1RQI7 1052 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 ASGR1P07306 291 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 PTGS1P23219 599 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 FGD1P98174 961 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 RTN1Q16799 776 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 GNASQ5JWF2 1037 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 Q6ZUG5 572 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 NSUN6Q8TEA1 469 aaKnown RBP20.05■□□□□ 0.8
USP39-208ENST00000455732 ZSWIM6Q9HCJ5 1215 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 Q9Y3F1 56 aa20.05■□□□□ 0.8
USP39-208ENST00000455732 RBM47A0AV96 593 aaKnown RBP20.04■□□□□ 0.8
USP39-208ENST00000455732 CFBP00751 764 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 TLE2Q04725 743 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 PDE4DQ08499 809 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 PPP2R5BQ15173 497 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 NOL8Q76FK4 1167 aaKnown RBP20.04■□□□□ 0.8
USP39-208ENST00000455732 RUFY3Q7L099 469 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 TLK2Q86UE8 772 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 TAAR1Q96RJ0 339 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 IWS1Q96ST2 819 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 RMDN3Q96TC7 470 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 STARD7Q9NQZ5 370 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 PDLIM7Q9NR12 457 aa20.04■□□□□ 0.8
USP39-208ENST00000455732 ELP1O95163 1332 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 CNTNAP5Q8WYK1 1306 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 GOLGA8AA7E2F4 631 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 MDM2Q00987 491 aaPredicted RBP20.03■□□□□ 0.8
USP39-208ENST00000455732 BEX3Q00994 111 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 FUT2Q10981 343 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 DUSP28Q4G0W2 176 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 CMTR1Q8N1G2 835 aaKnown RBP20.03■□□□□ 0.8
USP39-208ENST00000455732 BRF1Q92994 677 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 GLT1D1Q96MS3 346 aa20.03■□□□□ 0.8
USP39-208ENST00000455732 GCOM1H8Y6P7 765 aaPredicted RBP20.02■□□□□ 0.8
USP39-208ENST00000455732 DYNC1LI2O43237 492 aaPredicted RBP20.02■□□□□ 0.8
USP39-208ENST00000455732 POLR2MP0CAP2 368 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 EVCP57679 992 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 ANAPC15P60006 121 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 ANKRD33Q7Z3H0 272 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 SH3RF1Q7Z6J0 888 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 PIBF1Q8WXW3 757 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 TOX2Q96NM4 488 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 PXMP2Q9NR77 195 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 FAM217BQ9NTX9 383 aaPredicted RBP20.02■□□□□ 0.8
USP39-208ENST00000455732 PRKAG2Q9UGJ0 569 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 CYP46A1Q9Y6A2 500 aa20.02■□□□□ 0.8
USP39-208ENST00000455732 MYH7BA7E2Y1 1941 aa20.02■□□□□ 0.79
USP39-208ENST00000455732 CCDC196A0A1B0GTZ2 297 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 TRIM43BA6NCK2 446 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 METAP2P50579 478 aaKnown RBP eCLIP20.01■□□□□ 0.79
USP39-208ENST00000455732 CDK7P50613 346 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 APOBRQ0VD83 1088 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 FSCN1Q16658 493 aaKnown RBP20.01■□□□□ 0.79
USP39-208ENST00000455732 ARHGEF16Q5VV41 709 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 TRIM43Q96BQ3 446 aaPredicted RBP20.01■□□□□ 0.79
USP39-208ENST00000455732 IL17RAQ96F46 866 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 WDR11Q9BZH6 1224 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 UBE2OQ9C0C9 1292 aaKnown RBP20.01■□□□□ 0.79
USP39-208ENST00000455732 AP5M1Q9H0R1 490 aa20.01■□□□□ 0.79
USP39-208ENST00000455732 PIK3CDO00329 1044 aa20■□□□□ 0.79
USP39-208ENST00000455732 PQBP1O60828 265 aaKnown RBP20■□□□□ 0.79
USP39-208ENST00000455732 CLTBP09497 229 aa20■□□□□ 0.79
USP39-208ENST00000455732 HOXA13P31271 388 aaPredicted RBP20■□□□□ 0.79
USP39-208ENST00000455732 TDHQ8IZJ6 230 aa20■□□□□ 0.79
USP39-208ENST00000455732 SCFD2Q8WU76 684 aa20■□□□□ 0.79
USP39-208ENST00000455732 LBHD1Q9BQE6 289 aaPredicted RBP20■□□□□ 0.79
USP39-208ENST00000455732 PRDM5Q9NQX1 630 aaPredicted RBP20■□□□□ 0.79
USP39-208ENST00000455732 LAMA2P24043 3122 aaKnown RBP20■□□□□ 0.79
USP39-208ENST00000455732 FRMPD4Q14CM0 1322 aa20■□□□□ 0.79
USP39-208ENST00000455732 SCN10AQ9Y5Y9 1956 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 SOX1O00570 391 aaPredicted RBP19.99■□□□□ 0.79
USP39-208ENST00000455732 NKRFO15226 690 aaKnown RBP eCLIP19.99■□□□□ 0.79
USP39-208ENST00000455732 EIF2AK2P19525 551 aaKnown RBP19.99■□□□□ 0.79
USP39-208ENST00000455732 CDC27P30260 824 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 FAAP100Q0VG06 881 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 STXBP2Q15833 593 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 TEX2Q8IWB9 1127 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 CCDC82Q8N4S0 544 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 PDCD2LQ9BRP1 358 aa19.99■□□□□ 0.79
USP39-208ENST00000455732 A0A0U1RQG5 324 aaPredicted RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms