RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 FCHSD1Q86WN1 690 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 ZNF713Q8N859 430 aaPredicted RBP8.14□□□□□ -1.11
COMMD1-205ENST00000455659 SMARCC2Q8TAQ2 1214 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 MORC4Q8TE76 937 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 NSUN6Q8TEA1 469 aaKnown RBP8.14□□□□□ -1.11
COMMD1-205ENST00000455659 PHKBQ93100 1093 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 RMDN3Q96TC7 470 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 LARP6Q9BRS8 491 aaKnown RBP8.14□□□□□ -1.11
COMMD1-205ENST00000455659 SLC26A6Q9BXS9 759 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 C22orf23Q9BZE7 217 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 MAF1Q9H063 256 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 PXMP2Q9NR77 195 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 FAM217BQ9NTX9 383 aaPredicted RBP8.14□□□□□ -1.11
COMMD1-205ENST00000455659 FAM184BQ9ULE4 1060 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 LAMA2P24043 3122 aaKnown RBP8.14□□□□□ -1.11
COMMD1-205ENST00000455659 LTBP2Q14767 1821 aa8.14□□□□□ -1.11
COMMD1-205ENST00000455659 SCN10AQ9Y5Y9 1956 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 TRIOBPQ9H2D6 2365 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 STXBP3O00186 592 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 PPFIA3O75145 1194 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 PGK1P00558 417 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 SCG2P13521 617 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 ADCYAP1R1P41586 468 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 ADCY7P51828 1080 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 NEK4P51957 841 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 UBE2SQ16763 222 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 PFKFB3Q16875 520 aaPredicted RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 CPLX2Q6PUV4 134 aaKnown RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 NECAB2Q7Z6G3 386 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 UBE2Q1Q7Z7E8 422 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 RNF180Q86T96 592 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 TRIM22Q8IYM9 498 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 SAMD3Q8N6K7 520 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 IL31RAQ8NI17 732 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 TBC1D5Q92609 795 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 PAWRQ96IZ0 340 aaKnown RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 PDCD2LQ9BRP1 358 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 RNF26Q9BY78 433 aaPredicted RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 SLKQ9H2G2 1235 aaPredicted RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 C11orf49Q9H6J7 331 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 SPC25Q9HBM1 224 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 BARHL2Q9NY43 387 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 MAP3K20Q9NYL2 800 aaKnown RBP8.13□□□□□ -1.11
COMMD1-205ENST00000455659 TPCN1Q9ULQ1 816 aa8.13□□□□□ -1.11
COMMD1-205ENST00000455659 STK36Q9NRP7 1315 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 MYADML2A6NDP7 307 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 SPDYE3A6NKU9 549 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 PIK3CDO00329 1044 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 ADAMTS4O75173 837 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 DUSP11O75319 330 aaKnown RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 CDKL5O76039 1030 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 LARGE1O95461 756 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 C6orf222P0C671 652 aaPredicted RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 IFNAR1P17181 557 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 CCND2P30279 289 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 RBM25P49756 843 aaKnown RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 MNX1P50219 401 aaPredicted RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 TNFAIP2Q03169 654 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 SCRN1Q12765 414 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 LRRC41Q15345 812 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 GJC2Q5T442 439 aaPredicted RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 TYW1BQ6NUM6 668 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 USP17L6PQ6QN14 398 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 CCDC148Q8NFR7 591 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 SCFD2Q8WU76 684 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 CCDC12Q8WUD4 166 aaPredicted RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 GTF3C6Q969F1 213 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 ZNF274Q96GC6 653 aaPredicted RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 TAAR1Q96RJ0 339 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 IWS1Q96ST2 819 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 HTATIP2Q9BUP3 242 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 PSTPIP2Q9H939 334 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 PDGFCQ9NRA1 345 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
COMMD1-205ENST00000455659 TANC1Q9C0D5 1861 aa8.12□□□□□ -1.11
COMMD1-205ENST00000455659 MEIS2O14770 477 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 PFKFB2O60825 505 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 ARIH2O95376 493 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 DEXIO95424 95 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 NR3C2P08235 984 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 COL6A1P12109 1028 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 MYCLP12524 364 aaPredicted RBP8.11□□□□□ -1.11
COMMD1-205ENST00000455659 SMPD1P17405 629 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 PTGS1P23219 599 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 CST5P28325 142 aaPredicted RBP8.11□□□□□ -1.11
COMMD1-205ENST00000455659 AP3B2Q13367 1082 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 TTLL4Q14679 1199 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 PGM5Q15124 567 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 RABEP1Q15276 862 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 STXBP2Q15833 593 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 NTRK3Q16288 839 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 FSCN1Q16658 493 aaKnown RBP8.11□□□□□ -1.11
COMMD1-205ENST00000455659 GNPTABQ3T906 1256 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 TAPT1Q6NXT6 567 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 SEPT14Q6ZU15 432 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 ARRDC4Q8NCT1 418 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 OR6J1Q8NGC5 347 aa8.11□□□□□ -1.11
COMMD1-205ENST00000455659 TBC1D32Q96NH3 1257 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms