RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.45■■□□□ 1.98
PTPRA-208ENST00000455631 TRIP12Q14669 1992 aaPredicted RBP27.45■■□□□ 1.98
PTPRA-208ENST00000455631 LCHNA4D1U4 455 aa27.44■■□□□ 1.98
PTPRA-208ENST00000455631 NKRFO15226 690 aaKnown RBP eCLIP27.44■■□□□ 1.98
PTPRA-208ENST00000455631 CTDSPL2Q05D32 466 aa27.44■■□□□ 1.98
PTPRA-208ENST00000455631 TTBK2Q6IQ55 1244 aa27.44■■□□□ 1.98
PTPRA-208ENST00000455631 COPS5Q92905 334 aa27.44■■□□□ 1.98
PTPRA-208ENST00000455631 WDR5P61964 334 aaKnown RBP27.43■■□□□ 1.98
PTPRA-208ENST00000455631 SYDE2Q5VT97 1194 aa27.43■■□□□ 1.98
PTPRA-208ENST00000455631 TMCO2Q7Z6W1 182 aaPredicted RBP27.43■■□□□ 1.98
PTPRA-208ENST00000455631 CCDC155Q8N6L0 562 aa27.43■■□□□ 1.98
PTPRA-208ENST00000455631 SCFD2Q8WU76 684 aa27.43■■□□□ 1.98
PTPRA-208ENST00000455631 MPHOSPH6Q99547 160 aaKnown RBP27.43■■□□□ 1.98
PTPRA-208ENST00000455631 ZBED2Q9BTP6 218 aa27.43■■□□□ 1.98
PTPRA-208ENST00000455631 INCENPQ9NQS7 918 aa27.43■■□□□ 1.98
PTPRA-208ENST00000455631 A6NJR5 290 aa27.42■■□□□ 1.98
PTPRA-208ENST00000455631 RANBP6O60518 1105 aaKnown RBP27.42■■□□□ 1.98
PTPRA-208ENST00000455631 PTGISQ16647 500 aa27.42■■□□□ 1.98
PTPRA-208ENST00000455631 RNF207Q6ZRF8 634 aa27.42■■□□□ 1.98
PTPRA-208ENST00000455631 MTUS1Q9ULD2 1270 aa27.42■■□□□ 1.98
PTPRA-208ENST00000455631 FRMPD2Q68DX3 1309 aaPredicted RBP27.41■■□□□ 1.98
PTPRA-208ENST00000455631 FSD1Q9BTV5 496 aa27.41■■□□□ 1.98
PTPRA-208ENST00000455631 CD320Q9NPF0 282 aa27.41■■□□□ 1.98
PTPRA-208ENST00000455631 PI4K2BG5E9Z4 385 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 TXNP10599 105 aaKnown RBP27.4■■□□□ 1.98
PTPRA-208ENST00000455631 DEFB103AP81534 67 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 BTNL9Q6UXG8 535 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 CAGE1Q8TC20 777 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 AFAP1L1Q8TED9 768 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 CLEC4DQ8WXI8 215 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 LMCD1Q9NZU5 365 aa27.4■■□□□ 1.98
PTPRA-208ENST00000455631 BRWD1Q9NSI6 2320 aa27.39■■□□□ 1.98
PTPRA-208ENST00000455631 GPCPD1Q9NPB8 672 aa27.39■■□□□ 1.98
PTPRA-208ENST00000455631 EDNRBP24530 442 aa27.38■■□□□ 1.97
PTPRA-208ENST00000455631 RPS6P62753 249 aaKnown RBP27.38■■□□□ 1.97
PTPRA-208ENST00000455631 ZMYM1Q5SVZ6 1142 aa27.38■■□□□ 1.97
PTPRA-208ENST00000455631 LRRC8DQ7L1W4 858 aa27.38■■□□□ 1.97
PTPRA-208ENST00000455631 UBE2ZQ9H832 354 aaPredicted RBP27.38■■□□□ 1.97
PTPRA-208ENST00000455631 SIP14410 1827 aa27.38■■□□□ 1.97
PTPRA-208ENST00000455631 SELPP16109 830 aa27.37■■□□□ 1.97
PTPRA-208ENST00000455631 NOVP48745 357 aa27.37■■□□□ 1.97
PTPRA-208ENST00000455631 CNKSR3Q6P9H4 555 aa27.37■■□□□ 1.97
PTPRA-208ENST00000455631 DNERQ8NFT8 737 aa27.37■■□□□ 1.97
PTPRA-208ENST00000455631 SUGCTQ9HAC7 445 aa27.37■■□□□ 1.97
PTPRA-208ENST00000455631 FOXP2O15409 715 aa27.36■■□□□ 1.97
PTPRA-208ENST00000455631 ARIH2O95376 493 aa27.36■■□□□ 1.97
PTPRA-208ENST00000455631 GPNMBQ14956 572 aa27.36■■□□□ 1.97
PTPRA-208ENST00000455631 GDF6Q6KF10 455 aaPredicted RBP27.36■■□□□ 1.97
PTPRA-208ENST00000455631 TOMM22Q9NS69 142 aa27.36■■□□□ 1.97
PTPRA-208ENST00000455631 B4DLN1 442 aa27.35■■□□□ 1.97
PTPRA-208ENST00000455631 MRPL12P52815 198 aaKnown RBP27.35■■□□□ 1.97
PTPRA-208ENST00000455631 AFG1LQ8WV93 481 aa27.35■■□□□ 1.97
PTPRA-208ENST00000455631 TGS1Q96RS0 853 aaKnown RBP27.35■■□□□ 1.97
PTPRA-208ENST00000455631 CTAGE1Q96RT6 745 aa27.35■■□□□ 1.97
PTPRA-208ENST00000455631 PNMA2Q9UL42 364 aa27.35■■□□□ 1.97
PTPRA-208ENST00000455631 TTC41PQ6P2S7 1318 aa27.35■■□□□ 1.97
PTPRA-208ENST00000455631 GJB5O95377 273 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 MMP3P08254 477 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 TOP1P11387 765 aaKnown RBP27.34■■□□□ 1.97
PTPRA-208ENST00000455631 KCNA5P22460 613 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 ALYREFQ86V81 257 aaKnown RBP27.34■■□□□ 1.97
PTPRA-208ENST00000455631 SESTD1Q86VW0 696 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 GJD3Q8N144 294 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 DHX38Q92620 1227 aaKnown RBP27.34■■□□□ 1.97
PTPRA-208ENST00000455631 CRBNQ96SW2 442 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 RAD9AQ99638 391 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 TMEM47Q9BQJ4 181 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 DCTPP1Q9H773 170 aa27.34■■□□□ 1.97
PTPRA-208ENST00000455631 LINC01553A4QN01 128 aa27.33■■□□□ 1.97
PTPRA-208ENST00000455631 PRR33A8MZF0 331 aa27.33■■□□□ 1.97
PTPRA-208ENST00000455631 ORC4O43929 436 aa27.33■■□□□ 1.97
PTPRA-208ENST00000455631 SSTR3P32745 418 aaPredicted RBP27.33■■□□□ 1.97
PTPRA-208ENST00000455631 ERVK-21P61565 698 aa27.33■■□□□ 1.97
PTPRA-208ENST00000455631 RRP12Q5JTH9 1297 aaKnown RBP27.33■■□□□ 1.97
PTPRA-208ENST00000455631 ANAPC4Q9UJX5 808 aa27.33■■□□□ 1.97
PTPRA-208ENST00000455631 MUC6Q6W4X9 2439 aa27.33■■□□□ 1.97
PTPRA-208ENST00000455631 ABHD14A-ACY1A0A1B0GW23 586 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 NBNO60934 754 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 PARNO95453 639 aaKnown RBP27.32■■□□□ 1.96
PTPRA-208ENST00000455631 LEXMQ3ZCV2 418 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 C20orf194Q5TEA3 1177 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 FAM117BQ6P1L5 589 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 FAM178BQ8IXR5 827 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 PI4K2BQ8TCG2 481 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 WDR19Q8NEZ3 1342 aa27.32■■□□□ 1.96
PTPRA-208ENST00000455631 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP27.31■■□□□ 1.96
PTPRA-208ENST00000455631 CXCL10P02778 98 aa27.31■■□□□ 1.96
PTPRA-208ENST00000455631 PDHBP11177 359 aa27.31■■□□□ 1.96
PTPRA-208ENST00000455631 CKBP12277 381 aa27.31■■□□□ 1.96
PTPRA-208ENST00000455631 TCTN1Q2MV58 587 aa27.31■■□□□ 1.96
PTPRA-208ENST00000455631 GH1P01241 217 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 IL9P15248 144 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 RBL2Q08999 1139 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 LY6KQ17RY6 165 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 USH1GQ495M9 461 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 VPS53Q5VIR6 699 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 CCDC62Q6P9F0 684 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 SEPT14Q6ZU15 432 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 CHST3Q7LGC8 479 aa27.3■■□□□ 1.96
PTPRA-208ENST00000455631 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms