RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 DESI2Q9BSY9 194 aa20.35■□□□□ 0.85
MECP2-205ENST00000453960 TTYH3Q9C0H2 523 aa20.35■□□□□ 0.85
MECP2-205ENST00000453960 LRRC27Q9C0I9 530 aa20.35■□□□□ 0.85
MECP2-205ENST00000453960 PSTPIP2Q9H939 334 aa20.35■□□□□ 0.85
MECP2-205ENST00000453960 MPHOSPH10O00566 681 aaKnown RBP20.34■□□□□ 0.85
MECP2-205ENST00000453960 H2AFXP16104 143 aaPredicted RBP20.34■□□□□ 0.85
MECP2-205ENST00000453960 UBXN1Q04323 297 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 SEPT2Q15019 361 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 UBE2SQ16763 222 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 QRICH1Q2TAL8 776 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 CYP26C1Q6V0L0 522 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 TEX2Q8IWB9 1127 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 FAM114A1Q8IWE2 563 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 CAPN11Q9UMQ6 739 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 KIF13BQ9NQT8 1826 aa20.34■□□□□ 0.85
MECP2-205ENST00000453960 TADA3O75528 432 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 SLURP2P0DP57 97 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 SLC16A2P36021 539 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 TNNI2P48788 182 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 GNG11P61952 73 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 PSMD2Q13200 908 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 FIGNQ5HY92 759 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 SLFN13Q68D06 897 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 ANKRD40Q6AI12 368 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 GUF1Q8N442 669 aaKnown RBP20.33■□□□□ 0.85
MECP2-205ENST00000453960 CSGALNACT2Q8N6G5 542 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 RETREG2Q8NC44 543 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 LRRN4CLQ8ND94 238 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 CPLX3Q8WVH0 158 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 KCNMB3Q9NPA1 279 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 DDX25Q9UHL0 483 aaKnown RBP20.33■□□□□ 0.85
MECP2-205ENST00000453960 MRFAP1Q9Y605 127 aa20.33■□□□□ 0.85
MECP2-205ENST00000453960 FCER1AP12319 257 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 CASQ1P31415 396 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 AP3B2Q13367 1082 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 ELF2Q15723 593 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 KRT79Q5XKE5 535 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 MSL1Q68DK7 614 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 BTNL9Q6UXG8 535 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 NUDT12Q9BQG2 462 aa20.33■□□□□ 0.84
MECP2-205ENST00000453960 POTEMA6NI47 508 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 KRT9P35527 623 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 MCM6Q14566 821 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 MEA1Q16626 185 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 ZNF662Q6ZS27 426 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 SUPT20HQ8NEM7 779 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 ERGIC2Q96RQ1 377 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 TUBGCP2Q9BSJ2 902 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 SEMA6BQ9H3T3 888 aa20.32■□□□□ 0.84
MECP2-205ENST00000453960 MAGEC2Q9UBF1 373 aaPredicted RBP20.32■□□□□ 0.84
MECP2-205ENST00000453960 TTC26A0AVF1 554 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 EFCAB8A8MWE9 144 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 SLC1A4P43007 532 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 CACNB3P54284 484 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 GRIPAP1Q4V328 841 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 MIIPQ5JXC2 388 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 SNX29Q8TEQ0 813 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 IQCDQ96DY2 449 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 NUP58Q9BVL2 599 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 FAM53CQ9NYF3 392 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 KDM3AQ9Y4C1 1321 aa20.31■□□□□ 0.84
MECP2-205ENST00000453960 RASSF10A6NK89 507 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 MEIS2O14770 477 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 URI1O94763 535 aaPredicted RBP20.3■□□□□ 0.84
MECP2-205ENST00000453960 ICA1Q05084 483 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 TCP10Q12799 353 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 CDC37Q16543 378 aaPredicted RBP20.3■□□□□ 0.84
MECP2-205ENST00000453960 SHROOM1Q2M3G4 852 aaPredicted RBP20.3■□□□□ 0.84
MECP2-205ENST00000453960 KCNK18Q7Z418 384 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 DEFB132Q7Z7B7 95 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 OR8K1Q8NGG5 319 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 DNAJC19Q96DA6 116 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 CNOT6LQ96LI5 555 aaKnown RBP20.3■□□□□ 0.84
MECP2-205ENST00000453960 NUP88Q99567 741 aaPredicted RBP20.3■□□□□ 0.84
MECP2-205ENST00000453960 MYO1AQ9UBC5 1043 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 DDX41Q9UJV9 622 aaKnown RBP20.3■□□□□ 0.84
MECP2-205ENST00000453960 ATAD5Q96QE3 1844 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 F5H6K3 240 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 ARHGAP25P42331 645 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 KLRC3Q07444 240 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 TUBB2AQ13885 445 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 ERCC6LQ2NKX8 1250 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 FBXO38Q6PIJ6 1188 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 CDK5RAP3Q96JB5 506 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 TUBB2BQ9BVA1 445 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 PCDHA1Q9Y5I3 950 aa20.3■□□□□ 0.84
MECP2-205ENST00000453960 A0A1W2PQJ5 194 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 FAM196BA6NMK8 535 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 YDJCA8MPS7 323 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 LRRC63Q05C16 580 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 ECM1Q16610 540 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 ABCB5Q2M3G0 1257 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 GLIPR1L2Q4G1C9 344 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 WDR59Q6PJI9 974 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 ANO3Q9BYT9 981 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 NT5C3AQ9H0P0 336 aa20.29■□□□□ 0.84
MECP2-205ENST00000453960 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.29■□□□□ 0.84
MECP2-205ENST00000453960 V9GYY5 206 aaPredicted RBP20.29■□□□□ 0.84
MECP2-205ENST00000453960 TBX3O15119 743 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms