RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 ZNF185O15231 689 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 SUN1O94901 812 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 VIL1P09327 827 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 PARP1P09874 1014 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 CSB-PGBD3P0DP91 1061 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 GNAZP19086 355 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 CTNNA1P35221 906 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 CARSP49589 748 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 SLC7A5Q01650 507 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 GUCY2DQ02846 1103 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 BNIP1Q12981 228 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 EIF4A2Q14240 407 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 TAF7Q15545 349 aaPredicted RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 USH1GQ495M9 461 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 GALNTL6Q49A17 601 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 VPS37DQ86XT2 251 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 MB21D1Q8N884 522 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 GFM2Q969S9 779 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 EAF2Q96CJ1 260 aaPredicted RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC42Q96M95 316 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 GBP5Q96PP8 586 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 THAP9Q9H5L6 903 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 PHAXQ9H814 394 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 ECT2Q9H8V3 914 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 NHEJ1Q9H9Q4 299 aaPredicted RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 PRDM16Q9HAZ2 1276 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 C9orf78Q9NZ63 289 aaPredicted RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 SUN2Q9UH99 717 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 PAIP2BQ9ULR5 123 aaKnown RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 PHF8Q9UPP1 1060 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF510Q9Y2H8 683 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 COMMD3-BMI1R4GMX3 469 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 NPATQ14207 1427 aa9.2□□□□□ -0.94
SMCO1-202ENST00000452776 MAGEA13PA6NCF6 341 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 KCNJ18B7U540 433 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PPP1R3GB7ZBB8 358 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 F8W031 263 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 H0YGN5 161 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 CTNND1O60716 968 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 OATP04181 439 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 SP100P23497 879 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PEX5P50542 639 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ALDH5A1P51649 535 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 USP4Q13107 963 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ADAM9Q13443 819 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 COL9A3Q14050 684 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 MAP7Q14244 749 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 KCNJ12Q14500 433 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 KPNB1Q14974 876 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 WASHC2DQ5SRD0 308 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 LRRC43Q8N309 656 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 RBBP8NLQ8NC74 664 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 SMC1BQ8NDV3 1235 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NCSTNQ92542 709 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PTPRN2Q92932 1015 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PBKQ96KB5 322 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF317Q96PQ6 595 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 MED15Q96RN5 788 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NDNQ99608 321 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 SLX1AQ9BQ83 275 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ALG1Q9BT22 464 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 FAM167BQ9BTA0 163 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 LRRC2Q9BYS8 371 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 RNPEPL1Q9HAU8 725 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PCMTD2Q9NV79 361 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 IL1RAPL1Q9NZN1 696 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 DDX25Q9UHL0 483 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NFS1Q9Y697 457 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PTPRMP28827 1452 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 RBM47A0AV96 593 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 TTC26A0AVF1 554 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 LGALS16A8MUM7 142 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 PHF20L1A8MW92 1017 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 KIF28PB7ZC32 967 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ACTN4O43707 911 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 LCA5LO95447 670 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ECEL1O95672 775 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 HSD17B3P37058 310 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 MATR3P43243 847 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 RASSF2P50749 326 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC15Q0P6D6 951 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 GSTA3Q16772 222 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 SPRED3Q2MJR0 410 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ARMC3Q5W041 872 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 KRT40Q6A162 431 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 CEP128Q6ZU80 1094 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ARHGAP27Q6ZUM4 889 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 SH3RF1Q7Z6J0 888 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ERICH1Q86X53 443 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 AGGF1Q8N302 714 aaeCLIP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ENDOVQ8N8Q3 282 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF526Q8TF50 670 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 DNAJC9Q8WXX5 260 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 LTV1Q96GA3 475 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NOX5Q96PH1 765 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 TIPINQ9BVW5 301 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 SH2D4AQ9H788 454 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 FAM114A2Q9NRY5 505 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms