RNA–Protein interactions for RNA: ENST00000452067.1

NUCKS1P1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1, humanhuman

BASIC

Gene NUCKS1P1, Length 703 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1P1-201ENST00000452067 TMEM40Q8WWA1 233 aa9.32□□□□□ -0.92
NUCKS1P1-201ENST00000452067 VWCEQ96DN2 955 aa9.32□□□□□ -0.92
NUCKS1P1-201ENST00000452067 CARS2Q9HA77 564 aaKnown RBP9.32□□□□□ -0.92
NUCKS1P1-201ENST00000452067 NCAPD2Q15021 1401 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 GCP02774 474 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 SRFP11831 508 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 POLR2BP30876 1174 aaKnown RBP9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 GBP1P32455 592 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 C9orf131Q5VYM1 1079 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 NLRC3Q7RTR2 1065 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ARHGEF25Q86VW2 580 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 EXOC6Q8TAG9 804 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 RTF1Q92541 710 aaKnown RBP9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 KRTAP4-8Q9BYQ9 185 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 GPR62Q9BZJ7 368 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 KCNH3Q9ULD8 1083 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ZNRF3Q9ULT6 936 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 VIRMAQ69YN4 1812 aaKnown RBP9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 NHSL1Q5SYE7 1610 aa9.31□□□□□ -0.92
NUCKS1P1-201ENST00000452067 RGPD2P0DJD1 1756 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 RGPD5Q99666 1765 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 LMO7Q8WWI1 1683 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 WASH4PA8MWX3 477 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 IPO8O15397 1037 aaKnown RBP9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 PLIN1O60240 522 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ZNF853P0CG23 659 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 EXOSC9Q06265 439 aaKnown RBP9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 GAB4Q2WGN9 574 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 LRRFIP1Q32MZ4 808 aaKnown RBP9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 CRBNQ96SW2 442 aa9.3□□□□□ -0.92
NUCKS1P1-201ENST00000452067 BCAR3O75815 825 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 PAPLNO95428 1278 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 NME1P15531 152 aaKnown RBP9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 PAK2Q13177 524 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 TMPRSS7Q7RTY8 843 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 TSR2Q969E8 191 aaKnown RBP9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 TRIT1Q9H3H1 467 aaKnown RBP9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 COL18A1P39060 1754 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 SOS1Q07889 1333 aaPredicted RBP9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 SPATA31A3Q5VYP0 1347 aa9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ZNF335Q9H4Z2 1342 aaPredicted RBP9.29□□□□□ -0.92
NUCKS1P1-201ENST00000452067 CPDO75976 1380 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 KIAA0232Q92628 1395 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 MAP3K5Q99683 1374 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 TNFRSF10CO14798 259 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ESR1P03372 595 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 JUNBP17275 347 aaPredicted RBP9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ZKSCAN2Q63HK3 967 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ATG4DQ86TL0 474 aaPredicted RBP9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 SMC4Q9NTJ3 1288 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 OVOS2A0A0G2JMS6 1433 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 ABCA3Q99758 1704 aa9.28□□□□□ -0.92
NUCKS1P1-201ENST00000452067 IMPDH2P12268 514 aa9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CCNFP41002 786 aa9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 AMOTQ4VCS5 1084 aa9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 BRINP3Q76B58 766 aa9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 FTSJ3Q8IY81 847 aaKnown RBP9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CHMP4AQ9BY43 222 aa9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 GPATCH2Q9NW75 528 aa9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 LAS1LQ9Y4W2 734 aaKnown RBP9.27□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CRB1P82279 1406 aa9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CHL1O00533 1208 aa9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 TPP2P29144 1249 aaPredicted RBP9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 RNF4P78317 190 aa9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 MTHFSDQ2M296 383 aaKnown RBP9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 NBPF12Q5TAG4 269 aaPredicted RBP9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CENPQQ7L2Z9 268 aaPredicted RBP9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 TSPYL5Q86VY4 417 aaPredicted RBP9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 FLAD1Q8NFF5 587 aa9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 ARHGAP45Q92619 1136 aa9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 FRAT1Q92837 279 aaPredicted RBP9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 PPT2Q9UMR5 302 aa9.26□□□□□ -0.93
NUCKS1P1-201ENST00000452067 SHISA3A0PJX4 238 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 PAX4O43316 350 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CHMP4BP1P59074 171 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 RAD51AP2Q09MP3 1159 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 TWISTNBQ3B726 338 aaPredicted RBP9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 PLEKHO1Q53GL0 409 aaPredicted RBP9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 C20orf194Q5TEA3 1177 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 ATF7IPQ6VMQ6 1270 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 GPRASP2Q96D09 838 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 LTV1Q96GA3 475 aaPredicted RBP9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 FERD3LQ96RJ6 166 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 SLC9A7Q96T83 725 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 GINM1Q9NU53 330 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CTNND2Q9UQB3 1225 aa9.25□□□□□ -0.93
NUCKS1P1-201ENST00000452067 BIN1O00499 593 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 VAMP4O75379 141 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 COL9A2Q14055 689 aaPredicted RBP9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 CREG2Q8IUH2 290 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 TMEM192Q8IY95 271 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 RBBP8NLQ8NC74 664 aaPredicted RBP9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 RASGRP4Q8TDF6 673 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 SSH1Q8WYL5 1049 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 FMNL2Q96PY5 1086 aa9.24□□□□□ -0.93
NUCKS1P1-201ENST00000452067 THUMPD2Q9BTF0 503 aaKnown RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms