RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 ESYT1Q9BSJ8 1104 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 AMNQ9BXJ7 453 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 RIOX1Q9H6W3 641 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 MTMR10Q9NXD2 777 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 CHD9Q3L8U1 2897 aa14.52□□□□□ -0.09
CPSF4-208ENST00000452047 PRUNE2Q8WUY3 3088 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 NKRFO15226 690 aaKnown RBP eCLIP14.51□□□□□ -0.09
CPSF4-208ENST00000452047 TLR3O15455 904 aaKnown RBP14.51□□□□□ -0.09
CPSF4-208ENST00000452047 CYTH3O43739 400 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 CPT1AP50416 773 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 HSD17B4P51659 736 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 PSMC6P62333 389 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 PURAQ00577 322 aaKnown RBP14.51□□□□□ -0.09
CPSF4-208ENST00000452047 COL9A3Q14050 684 aaPredicted RBP14.51□□□□□ -0.09
CPSF4-208ENST00000452047 BMP2KLQ5H9B9 411 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 TMEM67Q5HYA8 995 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 MFSD5Q6N075 450 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 OR6J1Q8NGC5 347 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 RMDN3Q96TC7 470 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 SEZ6LQ9BYH1 1024 aa14.51□□□□□ -0.09
CPSF4-208ENST00000452047 A6NJR5 290 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 TXNP10599 105 aaKnown RBP14.5□□□□□ -0.09
CPSF4-208ENST00000452047 CCDC62Q6P9F0 684 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 COPS5Q92905 334 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 IWS1Q96ST2 819 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 MTA3Q9BTC8 594 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 LY9Q9HBG7 655 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 PXMP2Q9NR77 195 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 POLR3EQ9NVU0 708 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 PCDHA1Q9Y5I3 950 aa14.5□□□□□ -0.09
CPSF4-208ENST00000452047 SLC27A2O14975 620 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 B4GALT4O60513 344 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 CFBP00751 764 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 SMAD3P84022 425 aaKnown RBP14.49□□□□□ -0.09
CPSF4-208ENST00000452047 TTLL4Q14679 1199 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 NECTIN1Q15223 517 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 CATIPQ7Z7H3 387 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 HOMER1Q86YM7 354 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 RNPC3Q96LT9 517 aaKnown RBP14.49□□□□□ -0.09
CPSF4-208ENST00000452047 PIGSQ96S52 555 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 MAP3K14Q99558 947 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 PPP1R12CQ9BZL4 782 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 TRPV6Q9H1D0 765 aa14.49□□□□□ -0.09
CPSF4-208ENST00000452047 ALDH8A1Q9H2A2 487 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-208ENST00000452047 GPHNQ9NQX3 736 aaPredicted RBP14.49□□□□□ -0.09
CPSF4-208ENST00000452047 UMODL1Q5DID0 1318 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 MYL3P08590 195 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 CSF2RAP15509 400 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 EIF2AK2P19525 551 aaKnown RBP14.48□□□□□ -0.09
CPSF4-208ENST00000452047 CYP2C18P33260 490 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 PPIGQ13427 754 aaKnown RBP eCLIP14.48□□□□□ -0.093e-6■□□□□ 10.9
CPSF4-208ENST00000452047 STXBP2Q15833 593 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 ARHGEF16Q5VV41 709 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 CREB3L3Q68CJ9 461 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 C16orf59Q7L2K0 433 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 ZNF654Q8IZM8 581 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 SAMD3Q8N6K7 520 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.48□□□□□ -0.091e-6■■■□□ 19
CPSF4-208ENST00000452047 MTG1Q9BT17 334 aaPredicted RBP14.48□□□□□ -0.09
CPSF4-208ENST00000452047 MYL10Q9BUA6 226 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 NOC4LQ9BVI4 516 aaKnown RBP14.48□□□□□ -0.09
CPSF4-208ENST00000452047 HIPK3Q9H422 1215 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 MAP3K20Q9NYL2 800 aaKnown RBP14.48□□□□□ -0.09
CPSF4-208ENST00000452047 STXBP5LQ9Y2K9 1186 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 CHD7Q9P2D1 2997 aa14.48□□□□□ -0.09
CPSF4-208ENST00000452047 TANC1Q9C0D5 1861 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 PNMA6FA0A0J9YX94 578 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 SH2B2O14492 632 aaPredicted RBP14.47□□□□□ -0.09
CPSF4-208ENST00000452047 PRC1O43663 620 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 DDAH1O94760 285 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 NR3C2P08235 984 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 HOXA13P31271 388 aaPredicted RBP14.47□□□□□ -0.09
CPSF4-208ENST00000452047 MCM5P33992 734 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 ARHGAP1Q07960 439 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 LY6KQ17RY6 165 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 BRDTQ58F21 947 aaPredicted RBP14.47□□□□□ -0.09
CPSF4-208ENST00000452047 TMEM240Q5SV17 173 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 CASC1Q6TDU7 716 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 SEPT14Q6ZU15 432 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 TMEM199Q8N511 208 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 GUCD1Q96NT3 240 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 PDCD2LQ9BRP1 358 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 SPZ1Q9BXG8 430 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 ANO2Q9NQ90 1003 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 MYH7BA7E2Y1 1941 aa14.47□□□□□ -0.09
CPSF4-208ENST00000452047 KPNA6O60684 536 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 EIF3JO75822 258 aaKnown RBP14.46□□□□□ -0.09
CPSF4-208ENST00000452047 RGS20O76081 388 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 GH1P01241 217 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 TRAF1Q13077 416 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 ZNF697Q5TEC3 545 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 RASIP1Q5U651 963 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 IL31RAQ8NI17 732 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 AFG1LQ8WV93 481 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 TMEM87BQ96K49 555 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 WNT8AQ9H1J5 351 aa14.46□□□□□ -0.09
CPSF4-208ENST00000452047 TRMT13Q9NUP7 481 aaKnown RBP14.46□□□□□ -0.09
CPSF4-208ENST00000452047 DDX41Q9UJV9 622 aaKnown RBP14.46□□□□□ -0.09
CPSF4-208ENST00000452047 VCANP13611 3396 aa14.45□□□□□ -0.1
CPSF4-208ENST00000452047 FRMPD4Q14CM0 1322 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms