RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 DDX4Q9NQI0 724 aaKnown RBP24.72■■□□□ 1.55
TTC3-210ENST00000450533 IDEP14735 1019 aa24.72■■□□□ 1.55
TTC3-210ENST00000450533 CYLC1P35663 651 aaPredicted RBP24.72■■□□□ 1.55
TTC3-210ENST00000450533 CAPZA3Q96KX2 299 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 ZKSCAN7Q9P0L1 754 aaPredicted RBP24.71■■□□□ 1.55
TTC3-210ENST00000450533 BBOX1O75936 387 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 PLEKP08567 350 aaPredicted RBP24.71■■□□□ 1.55
TTC3-210ENST00000450533 TMEM266Q2M3C6 531 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 FKBP15Q5T1M5 1219 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 CENPPQ6IPU0 288 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 KCNK18Q7Z418 384 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 ZSCAN29Q8IWY8 852 aaPredicted RBP24.71■■□□□ 1.55
TTC3-210ENST00000450533 RETREG2Q8NC44 543 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 SNX29Q8TEQ0 813 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 UIMC1Q96RL1 719 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 MXD3Q9BW11 206 aa24.71■■□□□ 1.55
TTC3-210ENST00000450533 SLURP2P0DP57 97 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 FXR2P51116 673 aaKnown RBP eCLIP24.7■■□□□ 1.548e-8■■■■□ 20.7
TTC3-210ENST00000450533 ASPRV1Q53RT3 343 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 TTBK2Q6IQ55 1244 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 GLIS3Q8NEA6 775 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 PODXL2Q9NZ53 605 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 EPHB6O15197 1021 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 KRT86O43790 486 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 ERLIN1O75477 346 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 IPO7O95373 1038 aaKnown RBP24.7■■□□□ 1.54
TTC3-210ENST00000450533 SLC16A2P36021 539 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 FAM193AP78312 1265 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 ATP2B2Q01814 1243 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 GABPAQ06546 454 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 UNC13DQ70J99 1090 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 KRT26Q7Z3Y9 468 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 ERGIC2Q96RQ1 377 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 PDE11AQ9HCR9 933 aa24.7■■□□□ 1.54
TTC3-210ENST00000450533 FAM207AQ9NSI2 230 aaPredicted RBP24.7■■□□□ 1.54
TTC3-210ENST00000450533 MACROD2A1Z1Q3 448 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 PPP1R11O60927 126 aaPredicted RBP24.69■■□□□ 1.54
TTC3-210ENST00000450533 PPP1R2P41236 205 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 LRRC41Q15345 812 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 ADGRF4Q8IZF3 695 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 MMS19Q96T76 1030 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 JMJD4Q9H9V9 463 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 L1RE1Q9UN81 338 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 SAR1BQ9Y6B6 198 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 ORC2Q13416 577 aaPredicted RBP24.69■■□□□ 1.54
TTC3-210ENST00000450533 HDXQ7Z353 690 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 STK17AQ9UEE5 414 aa24.69■■□□□ 1.54
TTC3-210ENST00000450533 EIF3CLB5ME19 914 aaKnown RBP24.68■■□□□ 1.54
TTC3-210ENST00000450533 TUBB4BP68371 445 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 EIF3CQ99613 913 aaKnown RBP24.68■■□□□ 1.54
TTC3-210ENST00000450533 THSD7AQ9UPZ6 1657 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 hCG_1984214I3L0E3 225 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 SNHG28P0DPA3 235 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 ADRA2BP18089 450 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 DDR1Q08345 913 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 ECM1Q16610 540 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 VWA3BQ502W6 1294 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 CCDC170Q8IYT3 715 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 ZNF713Q8N859 430 aaPredicted RBP24.68■■□□□ 1.54
TTC3-210ENST00000450533 NEK11Q8NG66 645 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 RAD54LQ92698 747 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 DDX12PQ92771 950 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 NDST4Q9H3R1 872 aa24.68■■□□□ 1.54
TTC3-210ENST00000450533 ZNF263O14978 683 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 SCNN1DP51172 638 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 KRT79Q5XKE5 535 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 CERS5Q8N5B7 392 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 PLIN4Q96Q06 1357 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 UBAP1LF5GYI3 381 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 TTLL1O95922 423 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 ZNF543Q08ER8 600 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 COBLL1Q53SF7 1204 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 CCDC42Q96M95 316 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 RAB34Q9BZG1 259 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 MMRN2Q9H8L6 949 aa24.67■■□□□ 1.54
TTC3-210ENST00000450533 IGKV6D-41A0A0C4DH26 115 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 MPHOSPH10O00566 681 aaKnown RBP24.66■■□□□ 1.54
TTC3-210ENST00000450533 KCTD1Q719H9 257 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 C2CD5Q86YS7 1000 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 SERPINB13Q9UIV8 391 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 PNMA6FA0A0J9YX94 578 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 PVALEFA0A1B0GWK0 134 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 ZNF185O15231 689 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 CCDC96Q2M329 555 aa24.66■■□□□ 1.54
TTC3-210ENST00000450533 PAPD7Q5XG87 772 aaKnown RBP24.66■■□□□ 1.54
TTC3-210ENST00000450533 SMCR8Q8TEV9 937 aaPredicted RBP24.66■■□□□ 1.54
TTC3-210ENST00000450533 N4BP1O75113 896 aaKnown RBP24.65■■□□□ 1.54
TTC3-210ENST00000450533 FIGNQ5HY92 759 aa24.65■■□□□ 1.54
TTC3-210ENST00000450533 EHBP1Q8NDI1 1231 aa24.65■■□□□ 1.54
TTC3-210ENST00000450533 RIC8AQ9NPQ8 531 aa24.65■■□□□ 1.54
TTC3-210ENST00000450533 USP40Q9NVE5 1235 aa24.65■■□□□ 1.54
TTC3-210ENST00000450533 DDX25Q9UHL0 483 aaKnown RBP24.65■■□□□ 1.54
TTC3-210ENST00000450533 SIK3Q9Y2K2 1263 aa24.65■■□□□ 1.54
TTC3-210ENST00000450533 GOLGB1Q14789 3259 aaKnown RBP24.65■■□□□ 1.54
TTC3-210ENST00000450533 A0A1W2PQJ5 194 aa24.64■■□□□ 1.54
TTC3-210ENST00000450533 RAD21O60216 631 aa24.64■■□□□ 1.54
TTC3-210ENST00000450533 HOXA10P31260 410 aaPredicted RBP24.64■■□□□ 1.54
TTC3-210ENST00000450533 PDIA5Q14554 519 aa24.64■■□□□ 1.54
TTC3-210ENST00000450533 GUF1Q8N442 669 aaKnown RBP24.64■■□□□ 1.54
TTC3-210ENST00000450533 ARHGAP20Q9P2F6 1191 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms