RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 MFSD5Q6N075 450 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 MB21D2Q8IYB1 491 aaPredicted RBP22.87■■□□□ 1.25
VCP-203ENST00000448530 TMEM199Q8N511 208 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 MTMR8Q96EF0 704 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 SENP2Q9HC62 589 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 ANO2Q9NQ90 1003 aa22.87■■□□□ 1.25
VCP-203ENST00000448530 EIF2AK2P19525 551 aaKnown RBP22.86■■□□□ 1.25
VCP-203ENST00000448530 PSMC6P62333 389 aa22.86■■□□□ 1.25
VCP-203ENST00000448530 TROAPQ12815 778 aa22.86■■□□□ 1.25
VCP-203ENST00000448530 IGDCC4Q8TDY8 1250 aa22.86■■□□□ 1.25
VCP-203ENST00000448530 PPP1R12CQ9BZL4 782 aa22.86■■□□□ 1.25
VCP-203ENST00000448530 LSG1Q9H089 658 aaKnown RBP22.86■■□□□ 1.25
VCP-203ENST00000448530 MAP3K20Q9NYL2 800 aaKnown RBP22.86■■□□□ 1.25
VCP-203ENST00000448530 COL20A1Q9P218 1284 aa22.86■■□□□ 1.25
VCP-203ENST00000448530 BAZ2BQ9UIF8 2168 aaKnown RBP22.86■■□□□ 1.25
VCP-203ENST00000448530 PRC1O43663 620 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 KPNA6O60684 536 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 CD4P01730 458 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 MCM5P33992 734 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 EPHB4P54760 987 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 ANTXR2P58335 489 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 FAM109BQ6ICB4 259 aaPredicted RBP22.85■■□□□ 1.25
VCP-203ENST00000448530 SEPT14Q6ZU15 432 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 SAMD3Q8N6K7 520 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 CTCFLQ8NI51 663 aaPredicted RBP22.85■■□□□ 1.25
VCP-203ENST00000448530 PIGSQ96S52 555 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 MTG1Q9BT17 334 aaPredicted RBP22.85■■□□□ 1.25
VCP-203ENST00000448530 RIOX1Q9H6W3 641 aa22.85■■□□□ 1.25
VCP-203ENST00000448530 GRIN2DO15399 1336 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 KIAA1217Q5T5P2 1943 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 PPP1R11O60927 126 aaPredicted RBP22.84■■□□□ 1.25
VCP-203ENST00000448530 KIF5BP33176 963 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 HSD17B4P51659 736 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 PURAQ00577 322 aaKnown RBP22.84■■□□□ 1.25
VCP-203ENST00000448530 NFXL1Q6ZNB6 911 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 TMTC2Q8N394 836 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 COPS5Q92905 334 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 MTA3Q9BTC8 594 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 HIPK3Q9H422 1215 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 PXMP2Q9NR77 195 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 MTMR10Q9NXD2 777 aa22.84■■□□□ 1.25
VCP-203ENST00000448530 PNMA6FA0A0J9YX94 578 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 SLC27A2O14975 620 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 EIF3JO75822 258 aaKnown RBP22.83■■□□□ 1.25
VCP-203ENST00000448530 SMAD3P84022 425 aaKnown RBP22.83■■□□□ 1.25
VCP-203ENST00000448530 ZNF697Q5TEC3 545 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 ZNF654Q8IZM8 581 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 TMEM87BQ96K49 555 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 TRPV6Q9H1D0 765 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 LY9Q9HBG7 655 aa22.83■■□□□ 1.25
VCP-203ENST00000448530 CCDC69A6NI79 296 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 A6NJR5 290 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 OPLAHO14841 1288 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 DDAH1O94760 285 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 ARIH2O95376 493 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 GH1P01241 217 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 NR3C2P08235 984 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 SUPT20HL2P0C7V6 817 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 CSF2RAP15509 400 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 CYP2C18P33260 490 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 FAM47CQ5HY64 1035 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 RNF20Q5VTR2 975 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 CREB3L3Q68CJ9 461 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 MAP3K14Q99558 947 aa22.82■■□□□ 1.24
VCP-203ENST00000448530 ALDH8A1Q9H2A2 487 aaPredicted RBP22.82■■□□□ 1.24
VCP-203ENST00000448530 GCOM1H8Y6P7 765 aaPredicted RBP22.81■■□□□ 1.24
VCP-203ENST00000448530 B4GALT4O60513 344 aa22.81■■□□□ 1.24
VCP-203ENST00000448530 POLR2MP0CAP2 368 aa22.81■■□□□ 1.24
VCP-203ENST00000448530 HOXA13P31271 388 aaPredicted RBP22.81■■□□□ 1.24
VCP-203ENST00000448530 GHRHRQ02643 423 aa22.81■■□□□ 1.24
VCP-203ENST00000448530 CCDC62Q6P9F0 684 aa22.81■■□□□ 1.24
VCP-203ENST00000448530 SKAP1Q86WV1 359 aa22.81■■□□□ 1.24
VCP-203ENST00000448530 PIBF1Q8WXW3 757 aa22.81■■□□□ 1.24
VCP-203ENST00000448530 CYTH3O43739 400 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 MYCLP12524 364 aaPredicted RBP22.8■■□□□ 1.24
VCP-203ENST00000448530 GNAQP50148 359 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 NECTIN1Q15223 517 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 LY6KQ17RY6 165 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 SLC35G1Q2M3R5 365 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 RRP36Q96EU6 259 aaKnown RBP22.8■■□□□ 1.24
VCP-203ENST00000448530 FAM161BQ96MY7 647 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.8■■□□□ 1.241e-6■■■■□ 21.5
VCP-203ENST00000448530 LZTS2Q9BRK4 669 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 MYL10Q9BUA6 226 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 MRVI1Q9Y6F6 885 aa22.8■■□□□ 1.24
VCP-203ENST00000448530 LAMA2P24043 3122 aaKnown RBP22.8■■□□□ 1.24
VCP-203ENST00000448530 CALM1P0DP23 149 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 CALM2P0DP24 149 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 CALM3P0DP25 149 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 CHMP4BP1P59074 171 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 NBPF20Q3BBV1 942 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 PSRC1Q6PGN9 363 aaPredicted RBP22.79■■□□□ 1.24
VCP-203ENST00000448530 AFG1LQ8WV93 481 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 CCDC136Q96JN2 1154 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 PDCD2LQ9BRP1 358 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 SPZ1Q9BXG8 430 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 SEC63Q9UGP8 760 aaKnown RBP22.79■■□□□ 1.24
VCP-203ENST00000448530 STXBP5LQ9Y2K9 1186 aa22.79■■□□□ 1.24
VCP-203ENST00000448530 SCN10AQ9Y5Y9 1956 aa22.78■■□□□ 1.24
VCP-203ENST00000448530 SH2B2O14492 632 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms