RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RPS6P62753 249 aaKnown RBP16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 PDE4DQ08499 809 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 CREB3L3Q68CJ9 461 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 RASEFQ8IZ41 740 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 MTG1Q9BT17 334 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 ALDH8A1Q9H2A2 487 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
PDLIM2-213ENST00000448520 LCTP09848 1927 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 PFKMP08237 780 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 PTGS1P23219 599 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 HSPA4P34932 840 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 CCL23P55773 120 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 PSMC6P62333 389 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 PURAQ00577 322 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 COL9A3Q14050 684 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 IQCA1Q86XH1 822 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 OR6J1Q8NGC5 347 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
PDLIM2-213ENST00000448520 MYL3P08590 195 aa16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 EDNRBP24530 442 aa16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 PPP2R5BQ15173 497 aa16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 SLC28A3Q9HAS3 691 aa16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 CXXC1Q9P0U4 656 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 CTNNA3Q9UI47 895 aa16.01■□□□□ 0.15
PDLIM2-213ENST00000448520 UMODL1Q5DID0 1318 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 TTC28Q96AY4 2481 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 PTPN11Q06124 597 aaPredicted RBP16■□□□□ 0.15
PDLIM2-213ENST00000448520 TTLL4Q14679 1199 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 IMMTQ16891 758 aaKnown RBP16■□□□□ 0.15
PDLIM2-213ENST00000448520 NFRKBQ6P4R8 1299 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 SLC30A10Q6XR72 485 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 WNT8AQ9H1J5 351 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 SNX14Q9Y5W7 946 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 SLC4A7Q9Y6M7 1214 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 VCANP13611 3396 aa16■□□□□ 0.15
PDLIM2-213ENST00000448520 LRRC37A2A6NM11 1700 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 TNKSO95271 1327 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 NEDD4P46934 1319 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 A6NJR5 290 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 ADCK5Q3MIX3 580 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 TJAP1Q5JTD0 557 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 C22orf23Q9BZE7 217 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 PRDM12Q9H4Q4 367 aa15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 TRMT13Q9NUP7 481 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-213ENST00000448520 TXNP10599 105 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 RFC2P35250 354 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 NBPF20Q3BBV1 942 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 ASPRV1Q53RT3 343 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 MCF2L2Q86YR7 1114 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 RETREG2Q8NC44 543 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 PNMA1Q8ND90 353 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 ATXN2LQ8WWM7 1075 aaKnown RBP15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 KCNB2Q92953 911 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 IWS1Q96ST2 819 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 ZKSCAN3Q9BRR0 538 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 UBA5Q9GZZ9 404 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 KAT14Q9H8E8 782 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 PCDHA11Q9Y5I1 949 aa15.98■□□□□ 0.15
PDLIM2-213ENST00000448520 ABCB11O95342 1321 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 E7EWF7 191 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 EPB41L2O43491 1005 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 KDM4AO75164 1064 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 GOLGA8HP0CJ92 632 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 CYP2C9P11712 490 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 ACTN1P12814 892 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 CPA1P15085 419 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 USH1GQ495M9 461 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 FAM47CQ5HY64 1035 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 USP38Q8NB14 1042 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 NSUN6Q8TEA1 469 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 SCLYQ96I15 445 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 ZSCAN10Q96SZ4 725 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 NKX2-4Q9H2Z4 354 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 MRPL11Q9Y3B7 192 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 NCOR1O75376 2440 aa15.97■□□□□ 0.15
PDLIM2-213ENST00000448520 ZBBXA8MT70 800 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 B4E1Z4 1266 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 PITPNM1O00562 1244 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 ATP2A2P16615 1042 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 BFSP2Q13515 415 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 STXBP2Q15833 593 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 CDC37Q16543 378 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 RNF20Q5VTR2 975 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 CCDC62Q6P9F0 684 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 ADGRF4Q8IZF3 695 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 PHOSPHO2Q8TCD6 241 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 VWCEQ96DN2 955 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 KIF2CQ99661 725 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 KRT23Q9C075 422 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 CNNM2Q9H8M5 875 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 ZSWIM5Q9P217 1185 aa15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 TRIP12Q14669 1992 aaPredicted RBP15.96■□□□□ 0.15
PDLIM2-213ENST00000448520 EIF5BO60841 1220 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms