RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 CYP2C9P11712 490 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 PDE4AP27815 886 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 QRICH1Q2TAL8 776 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 OTOP2Q7RTS6 562 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 RGS22Q8NE09 1264 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 SCLYQ96I15 445 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 MTG1Q9BT17 334 aaPredicted RBP33.06■■■□□ 2.88
CBX4-202ENST00000448310 KRT23Q9C075 422 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 VAT1LQ9HCJ6 419 aa33.06■■■□□ 2.88
CBX4-202ENST00000448310 GPHNQ9NQX3 736 aaPredicted RBP33.06■■■□□ 2.88
CBX4-202ENST00000448310 KIAA1217Q5T5P2 1943 aa33.05■■■□□ 2.88
CBX4-202ENST00000448310 NKRFO15226 690 aaKnown RBP eCLIP33.05■■■□□ 2.881e-6■□□□□ 10.1
CBX4-202ENST00000448310 ARIH2O95376 493 aa33.05■■■□□ 2.88
CBX4-202ENST00000448310 PARP1P09874 1014 aaKnown RBP33.05■■■□□ 2.88
CBX4-202ENST00000448310 TXNP10599 105 aaKnown RBP33.05■■■□□ 2.88
CBX4-202ENST00000448310 TAAR1Q96RJ0 339 aa33.05■■■□□ 2.88
CBX4-202ENST00000448310 COL20A1Q9P218 1284 aa33.05■■■□□ 2.88
CBX4-202ENST00000448310 GSPT1P15170 499 aaKnown RBP33.04■■■□□ 2.88
CBX4-202ENST00000448310 SYTL5Q8TDW5 730 aaPredicted RBP33.04■■■□□ 2.88
CBX4-202ENST00000448310 UBAC1Q9BSL1 405 aa33.04■■■□□ 2.88
CBX4-202ENST00000448310 RAD50Q92878 1312 aa33.03■■■□□ 2.88
CBX4-202ENST00000448310 B4DLN1 442 aa33.03■■■□□ 2.88
CBX4-202ENST00000448310 MRPL12P52815 198 aaKnown RBP33.03■■■□□ 2.88
CBX4-202ENST00000448310 NBPF20Q3BBV1 942 aa33.03■■■□□ 2.88
CBX4-202ENST00000448310 BRDTQ58F21 947 aaPredicted RBP33.03■■■□□ 2.88
CBX4-202ENST00000448310 FAM47CQ5HY64 1035 aa33.03■■■□□ 2.88
CBX4-202ENST00000448310 CNNM2Q9H8M5 875 aa33.03■■■□□ 2.88
CBX4-202ENST00000448310 JMJD4Q9H9V9 463 aa33.03■■■□□ 2.88
CBX4-202ENST00000448310 TTLL4Q14679 1199 aa33.02■■■□□ 2.88
CBX4-202ENST00000448310 MTIF3Q9H2K0 278 aaKnown RBP33.02■■■□□ 2.88
CBX4-202ENST00000448310 SUPT16HQ9Y5B9 1047 aaKnown RBP33.02■■■□□ 2.88
CBX4-202ENST00000448310 A6NJR5 290 aa33.01■■■□□ 2.87
CBX4-202ENST00000448310 IFIT1BQ5T764 474 aaKnown RBP33.01■■■□□ 2.87
CBX4-202ENST00000448310 TTC22Q5TAA0 569 aa33.01■■■□□ 2.87
CBX4-202ENST00000448310 FBXO11Q86XK2 927 aa33.01■■■□□ 2.87
CBX4-202ENST00000448310 STAG2Q8N3U4 1231 aa33.01■■■□□ 2.87
CBX4-202ENST00000448310 VWCEQ96DN2 955 aa33.01■■■□□ 2.87
CBX4-202ENST00000448310 SUPT20HL2P0C7V6 817 aa33■■■□□ 2.87
CBX4-202ENST00000448310 SEPT14Q6ZU15 432 aa33■■■□□ 2.87
CBX4-202ENST00000448310 CYB5R4Q7L1T6 521 aa33■■■□□ 2.87
CBX4-202ENST00000448310 CHD9Q3L8U1 2897 aa32.99■■■□□ 2.87
CBX4-202ENST00000448310 MCF2L2Q86YR7 1114 aa32.99■■■□□ 2.87
CBX4-202ENST00000448310 USP38Q8NB14 1042 aa32.99■■■□□ 2.87
CBX4-202ENST00000448310 NSUN6Q8TEA1 469 aaKnown RBP32.99■■■□□ 2.87
CBX4-202ENST00000448310 MSRAQ9UJ68 235 aa32.99■■■□□ 2.87
CBX4-202ENST00000448310 MRPL11Q9Y3B7 192 aaKnown RBP32.99■■■□□ 2.87
CBX4-202ENST00000448310 VCANP13611 3396 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 CHMP4BP1P59074 171 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 SEC23AQ15436 765 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 LY6KQ17RY6 165 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 CCDC62Q6P9F0 684 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 RPUSD2Q8IZ73 545 aaKnown RBP32.98■■■□□ 2.87
CBX4-202ENST00000448310 RMDN3Q96TC7 470 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 NKX2-4Q9H2Z4 354 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 PRDM12Q9H4Q4 367 aa32.98■■■□□ 2.87
CBX4-202ENST00000448310 KPNA6O60684 536 aa32.97■■■□□ 2.87
CBX4-202ENST00000448310 RAB30Q15771 203 aa32.97■■■□□ 2.87
CBX4-202ENST00000448310 AFG1LQ8WV93 481 aa32.97■■■□□ 2.87
CBX4-202ENST00000448310 MAF1Q9H063 256 aa32.97■■■□□ 2.87
CBX4-202ENST00000448310 YBX2Q9Y2T7 364 aaKnown RBP32.97■■■□□ 2.87
CBX4-202ENST00000448310 TANC1Q9C0D5 1861 aa32.97■■■□□ 2.87
CBX4-202ENST00000448310 MYH7BA7E2Y1 1941 aa32.96■■■□□ 2.87
CBX4-202ENST00000448310 TRIP12Q14669 1992 aaPredicted RBP32.96■■■□□ 2.87
CBX4-202ENST00000448310 BAZ2BQ9UIF8 2168 aaKnown RBP32.96■■■□□ 2.87
CBX4-202ENST00000448310 ZBBXA8MT70 800 aa32.96■■■□□ 2.87
CBX4-202ENST00000448310 EIF2AK2P19525 551 aaKnown RBP32.96■■■□□ 2.87
CBX4-202ENST00000448310 RABGGTBP53611 331 aa32.96■■■□□ 2.87
CBX4-202ENST00000448310 NFRKBQ6P4R8 1299 aa32.96■■■□□ 2.87
CBX4-202ENST00000448310 DEFB128Q7Z7B8 93 aa32.96■■■□□ 2.87
CBX4-202ENST00000448310 CFBP00751 764 aa32.95■■■□□ 2.87
CBX4-202ENST00000448310 STXBP2Q15833 593 aa32.95■■■□□ 2.87
CBX4-202ENST00000448310 ARHGEF16Q5VV41 709 aa32.95■■■□□ 2.87
CBX4-202ENST00000448310 CHST3Q7LGC8 479 aa32.95■■■□□ 2.87
CBX4-202ENST00000448310 SLC4A7Q9Y6M7 1214 aa32.95■■■□□ 2.87
CBX4-202ENST00000448310 KLRF2D3W0D1 207 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 OPLAHO14841 1288 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 IRX6P78412 446 aaPredicted RBP32.94■■■□□ 2.86
CBX4-202ENST00000448310 PTH1RQ03431 593 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 ARHGAP1Q07960 439 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 IWS1Q96ST2 819 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 GAS2L1Q99501 681 aaPredicted RBP32.94■■■□□ 2.86
CBX4-202ENST00000448310 AMNQ9BXJ7 453 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 MAD2L2Q9UI95 211 aa32.94■■■□□ 2.86
CBX4-202ENST00000448310 PPP1R11O60927 126 aaPredicted RBP32.93■■■□□ 2.86
CBX4-202ENST00000448310 GH1P01241 217 aa32.93■■■□□ 2.86
CBX4-202ENST00000448310 MMP3P08254 477 aa32.93■■■□□ 2.86
CBX4-202ENST00000448310 TET1Q8NFU7 2136 aa32.92■■■□□ 2.86
CBX4-202ENST00000448310 CYP21A2P08686 494 aa32.92■■■□□ 2.86
CBX4-202ENST00000448310 PPM1EQ8WY54 764 aa32.92■■■□□ 2.86
CBX4-202ENST00000448310 PXMP2Q9NR77 195 aa32.92■■■□□ 2.86
CBX4-202ENST00000448310 MYOGP15173 224 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 CHMLP26374 656 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 PTPN11Q06124 597 aaPredicted RBP32.91■■■□□ 2.86
CBX4-202ENST00000448310 TRDNQ13061 729 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 MTMR8Q96EF0 704 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 SLC28A3Q9HAS3 691 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 SENP2Q9HC62 589 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 NOD1Q9Y239 953 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 TAF6LQ9Y6J9 622 aa32.91■■■□□ 2.86
CBX4-202ENST00000448310 PALM3A6NDB9 673 aaPredicted RBP32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms