RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 PCDHA1Q9Y5I3 950 aa20.57■□□□□ 0.88
DDX56-207ENST00000448192 SLC27A2O14975 620 aa20.56■□□□□ 0.88
DDX56-207ENST00000448192 MYL3P08590 195 aa20.56■□□□□ 0.88
DDX56-207ENST00000448192 CPT1AP50416 773 aa20.56■□□□□ 0.88
DDX56-207ENST00000448192 EPHB4P54760 987 aa20.56■□□□□ 0.88
DDX56-207ENST00000448192 NKRFO15226 690 aaKnown RBP eCLIP20.55■□□□□ 0.88
DDX56-207ENST00000448192 PRC1O43663 620 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 EIF2AK2P19525 551 aaKnown RBP20.55■□□□□ 0.88
DDX56-207ENST00000448192 TTLL4Q14679 1199 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 STXBP2Q15833 593 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 SLC35G1Q2M3R5 365 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 ARHGEF16Q5VV41 709 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 SEPT14Q6ZU15 432 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 SLC43A3Q8NBI5 491 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 COPS5Q92905 334 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 IWS1Q96ST2 819 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 PPP1R12CQ9BZL4 782 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 RIOX1Q9H6W3 641 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 GPHNQ9NQX3 736 aaPredicted RBP20.55■□□□□ 0.88
DDX56-207ENST00000448192 POLR3EQ9NVU0 708 aa20.55■□□□□ 0.88
DDX56-207ENST00000448192 GRIN2DO15399 1336 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 OPLAHO14841 1288 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 CD4P01730 458 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 MCM5P33992 734 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 HSD17B4P51659 736 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 BRDTQ58F21 947 aaPredicted RBP20.54■□□□□ 0.88
DDX56-207ENST00000448192 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 MYL10Q9BUA6 226 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 LY9Q9HBG7 655 aa20.54■□□□□ 0.88
DDX56-207ENST00000448192 CYTH3O43739 400 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 ARIH2O95376 493 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 PURAQ00577 322 aaKnown RBP20.53■□□□□ 0.88
DDX56-207ENST00000448192 TRAF1Q13077 416 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 NECTIN1Q15223 517 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 MFSD5Q6N075 450 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 NFXL1Q6ZNB6 911 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 ZNF654Q8IZM8 581 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 CTCFLQ8NI51 663 aaPredicted RBP20.53■□□□□ 0.88
DDX56-207ENST00000448192 RNPC3Q96LT9 517 aaKnown RBP20.53■□□□□ 0.88
DDX56-207ENST00000448192 SEZ6LQ9BYH1 1024 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 TRPV6Q9H1D0 765 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 PXMP2Q9NR77 195 aa20.53■□□□□ 0.88
DDX56-207ENST00000448192 PNMA6FA0A0J9YX94 578 aa20.52■□□□□ 0.88
DDX56-207ENST00000448192 HOXA13P31271 388 aaPredicted RBP20.52■□□□□ 0.88
DDX56-207ENST00000448192 CCDC136Q96JN2 1154 aa20.52■□□□□ 0.88
DDX56-207ENST00000448192 MTG1Q9BT17 334 aaPredicted RBP20.52■□□□□ 0.88
DDX56-207ENST00000448192 MYH7BA7E2Y1 1941 aa20.52■□□□□ 0.88
DDX56-207ENST00000448192 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 A6NJR5 290 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 B4GALT4O60513 344 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 DDAH1O94760 285 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 NR3C2P08235 984 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 MYCLP12524 364 aaPredicted RBP20.51■□□□□ 0.87
DDX56-207ENST00000448192 KIF5BP33176 963 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 CYP2C18P33260 490 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 PPIGQ13427 754 aaKnown RBP eCLIP20.51■□□□□ 0.875e-9■■□□□ 11.4
DDX56-207ENST00000448192 COL9A3Q14050 684 aaPredicted RBP20.51■□□□□ 0.87
DDX56-207ENST00000448192 LY6KQ17RY6 165 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 CCDC62Q6P9F0 684 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 TMEM199Q8N511 208 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 TMEM87BQ96K49 555 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 MTA3Q9BTC8 594 aa20.51■□□□□ 0.87
DDX56-207ENST00000448192 MAP3K20Q9NYL2 800 aaKnown RBP20.51■□□□□ 0.87
DDX56-207ENST00000448192 GCOM1H8Y6P7 765 aaPredicted RBP20.5■□□□□ 0.87
DDX56-207ENST00000448192 SH2B2O14492 632 aaPredicted RBP20.5■□□□□ 0.87
DDX56-207ENST00000448192 KPNA6O60684 536 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 EIF3JO75822 258 aaKnown RBP20.5■□□□□ 0.87
DDX56-207ENST00000448192 POLR2MP0CAP2 368 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 CSF2RAP15509 400 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 GHRHRQ02643 423 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 FAM47CQ5HY64 1035 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 MAP3K14Q99558 947 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 LRRC2Q9BYS8 371 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 ALDH8A1Q9H2A2 487 aaPredicted RBP20.5■□□□□ 0.87
DDX56-207ENST00000448192 HIPK3Q9H422 1215 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 MTMR10Q9NXD2 777 aa20.5■□□□□ 0.87
DDX56-207ENST00000448192 SCN10AQ9Y5Y9 1956 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 CDC45O75419 566 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 GH1P01241 217 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 CHMP4BP1P59074 171 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 FCHSD1Q86WN1 690 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 SAMD3Q8N6K7 520 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 PPP1R13LQ8WUF5 828 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 RRP36Q96EU6 259 aaKnown RBP20.49■□□□□ 0.87
DDX56-207ENST00000448192 FAM161BQ96MY7 647 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.49■□□□□ 0.878e-8■■□□□ 14.3
DDX56-207ENST00000448192 PDCD2LQ9BRP1 358 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 MRVI1Q9Y6F6 885 aa20.49■□□□□ 0.87
DDX56-207ENST00000448192 ACRP10323 421 aa20.48■□□□□ 0.87
DDX56-207ENST00000448192 RXRAP19793 462 aa20.48■□□□□ 0.87
DDX56-207ENST00000448192 ARHGAP1Q07960 439 aa20.48■□□□□ 0.87
DDX56-207ENST00000448192 NBPF20Q3BBV1 942 aa20.48■□□□□ 0.87
DDX56-207ENST00000448192 SPZ1Q9BXG8 430 aa20.48■□□□□ 0.87
DDX56-207ENST00000448192 TRMT13Q9NUP7 481 aaKnown RBP20.48■□□□□ 0.87
DDX56-207ENST00000448192 DDX41Q9UJV9 622 aaKnown RBP20.48■□□□□ 0.87
DDX56-207ENST00000448192 UMODL1Q5DID0 1318 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms