RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 TOM1O60784 492 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 NDUFA10O95299 355 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 FMNL1O95466 1100 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 FOSP01100 380 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 TNNC2P02585 160 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 PCCAP05165 728 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 GSTA1P08263 222 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 GSTA2P09210 222 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 GOLGA8HP0CJ92 632 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 C2orf54Q08AI8 447 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MFSD14BQ5SR56 506 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 KAZNQ674X7 775 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 HIBCHQ6NVY1 386 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MAP7D3Q8IWC1 876 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 ZBTB8OSQ8IWT0 167 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 GLG1Q92896 1179 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 SDCCAG3Q96C92 435 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 NACA2Q9H009 215 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 USP40Q9NVE5 1235 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MAGI2Q86UL8 1455 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 KCNQ3O43525 872 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 PFDN1O60925 122 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 COBLO75128 1261 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MFAP3P55082 362 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 HNRNPH2P55795 449 aaKnown RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 PDE1BQ01064 536 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MYL7Q01449 175 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 TERF2Q15554 542 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MMEL1Q495T6 779 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 FBXO11Q86XK2 927 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 ZBTB38Q8NAP3 1195 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 NT5C1BQ96P26 610 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 TXLNGQ9NUQ3 528 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 BAG5Q9UL15 447 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 KIAA1024Q9UPX6 916 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 MRPL11Q9Y3B7 192 aaKnown RBP8.47□□□□□ -1.05
NEDD9-204ENST00000448183 CD2APQ9Y5K6 639 aa8.47□□□□□ -1.05
NEDD9-204ENST00000448183 FRMPD2Q68DX3 1309 aaPredicted RBP8.46□□□□□ -1.05
NEDD9-204ENST00000448183 GOLGA8QA0A0J9YX86 632 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 GOLGA8OA6NCC3 632 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 ERVV-2B6SEH9 535 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 GOLGA8NF8WBI6 632 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 H7C0C1 242 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 ECEL1O95672 775 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 GUCY2CP25092 1073 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 ATP5OP48047 213 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 RCN2Q14257 317 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 SLMAPQ14BN4 828 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 ODR4Q5SWX8 454 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 JADE1Q6IE81 842 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 EMBQ6PCB8 327 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 TMTC3Q6ZXV5 915 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 NEK9Q8TD19 979 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 TRIM11Q96F44 468 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 TEKT3Q9BXF9 490 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 ABCB6Q9NP58 842 aa8.46□□□□□ -1.05
NEDD9-204ENST00000448183 SAMSN1Q9NSI8 373 aaKnown RBP8.46□□□□□ -1.05
NEDD9-204ENST00000448183 ABCA8O94911 1581 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 EIF3CLB5ME19 914 aaKnown RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 AFPP02771 609 aaKnown RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 POLR2MP0CAP2 368 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 SKIP12755 728 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 GYG1P46976 350 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 EIF3BP55884 814 aaKnown RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 PTPN21Q16825 1174 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 RINT1Q6NUQ1 792 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 PLA2G4DQ86XP0 818 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 TAB3Q8N5C8 712 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 EIF3CQ99613 913 aaKnown RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 JPH2Q9BR39 696 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 FTOQ9C0B1 505 aaKnown RBP eCLIP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 ZNF277Q9NRM2 450 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 RWDD2AQ9UIY3 292 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 TESPA1A2RU30 521 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 TTC4O95801 387 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 CCNE1P24864 410 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 CXCR5P32302 372 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 BCAMP50895 628 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 KIF11P52732 1056 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 CYP4A11Q02928 519 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 CYP4F22Q6NT55 531 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 PDZD8Q8NEN9 1154 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 LRGUKQ96M69 825 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 TUBB6Q9BUF5 446 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 STK17AQ9UEE5 414 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 SCOCQ9UIL1 159 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 KDM5DQ9BY66 1539 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 ADGBQ8N7X0 1667 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 HMGB1P1B2RPK0 211 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 CAPN9O14815 690 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 ECM2O94769 699 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 FTCDO95954 541 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 TMEM191BP0C7N4 346 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 RESTQ13127 1097 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 SGO2Q562F6 1265 aa8.46□□□□□ -1.06
NEDD9-204ENST00000448183 ZNF589Q86UQ0 364 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-204ENST00000448183 LRRC47Q8N1G4 583 aaKnown RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms