RNA–Protein interactions for RNA: ENST00000447698.5

STRADB-204, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 4

Gene STRADB, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-204ENST00000447698 RBM47A0AV96 593 aaKnown RBP27.01■■□□□ 1.91
STRADB-204ENST00000447698 B4DLN1 442 aa27.01■■□□□ 1.91
STRADB-204ENST00000447698 EIF2AK2P19525 551 aaKnown RBP27.01■■□□□ 1.91
STRADB-204ENST00000447698 MRPL12P52815 198 aaKnown RBP27.01■■□□□ 1.91
STRADB-204ENST00000447698 FGD1P98174 961 aa27.01■■□□□ 1.91
STRADB-204ENST00000447698 GHRHRQ02643 423 aa27.01■■□□□ 1.91
STRADB-204ENST00000447698 ARHGEF16Q5VV41 709 aa27.01■■□□□ 1.91
STRADB-204ENST00000447698 ZBTB43O43298 467 aa27■■□□□ 1.91
STRADB-204ENST00000447698 EPB41L2O43491 1005 aaKnown RBP27■■□□□ 1.91
STRADB-204ENST00000447698 CASTP20810 708 aaKnown RBP27■■□□□ 1.91
STRADB-204ENST00000447698 TRIM60Q495X7 471 aa27■■□□□ 1.91
STRADB-204ENST00000447698 DUSP28Q4G0W2 176 aa27■■□□□ 1.91
STRADB-204ENST00000447698 AP5M1Q9H0R1 490 aa27■■□□□ 1.91
STRADB-204ENST00000447698 PXMP2Q9NR77 195 aa27■■□□□ 1.91
STRADB-204ENST00000447698 SEC63Q9UGP8 760 aaKnown RBP27■■□□□ 1.91
STRADB-204ENST00000447698 NAP1L2Q9ULW6 460 aaPredicted RBP27■■□□□ 1.91
STRADB-204ENST00000447698 MOXD2PA6NHM9 499 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 GCOM1H8Y6P7 765 aaPredicted RBP26.99■■□□□ 1.91
STRADB-204ENST00000447698 ASGR1P07306 291 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 POLR2MP0CAP2 368 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 RPS6KB1P23443 525 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 NKX3-2P78367 333 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 APOBRQ0VD83 1088 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 SNX17Q15036 470 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 PCSK9Q8NBP7 692 aaKnown RBP26.99■■□□□ 1.91
STRADB-204ENST00000447698 IWS1Q96ST2 819 aa26.99■■□□□ 1.91
STRADB-204ENST00000447698 MAP3K20Q9NYL2 800 aaKnown RBP26.99■■□□□ 1.91
STRADB-204ENST00000447698 PSMA5P28066 241 aa26.98■■□□□ 1.91
STRADB-204ENST00000447698 FSCN1Q16658 493 aaKnown RBP26.98■■□□□ 1.91
STRADB-204ENST00000447698 RTN1Q16799 776 aa26.98■■□□□ 1.91
STRADB-204ENST00000447698 FCHSD1Q86WN1 690 aa26.98■■□□□ 1.91
STRADB-204ENST00000447698 BRF1Q92994 677 aa26.98■■□□□ 1.91
STRADB-204ENST00000447698 STARD7Q9NQZ5 370 aa26.98■■□□□ 1.91
STRADB-204ENST00000447698 KIAA1217Q5T5P2 1943 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 GOLGA8AA7E2F4 631 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 GOLGA8BA8MQT2 603 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 NR3C2P08235 984 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 SEPT14Q6ZU15 432 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 SAMD3Q8N6K7 520 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 SCFD2Q8WU76 684 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 FAM217BQ9NTX9 383 aaPredicted RBP26.97■■□□□ 1.91
STRADB-204ENST00000447698 RBM28Q9NW13 759 aaKnown RBP26.97■■□□□ 1.91
STRADB-204ENST00000447698 Q9Y3F1 56 aa26.97■■□□□ 1.91
STRADB-204ENST00000447698 CDC27P30260 824 aa26.96■■□□□ 1.91
STRADB-204ENST00000447698 STXBP2Q15833 593 aa26.96■■□□□ 1.91
STRADB-204ENST00000447698 C1orf53Q5VUE5 145 aa26.96■■□□□ 1.91
STRADB-204ENST00000447698 COPS5Q92905 334 aa26.96■■□□□ 1.91
STRADB-204ENST00000447698 VTI1AQ96AJ9 217 aa26.96■■□□□ 1.91
STRADB-204ENST00000447698 CNTNAP5Q8WYK1 1306 aa26.95■■□□□ 1.91
STRADB-204ENST00000447698 ARIH2O95376 493 aa26.95■■□□□ 1.9
STRADB-204ENST00000447698 MYCLP12524 364 aaPredicted RBP26.95■■□□□ 1.9
STRADB-204ENST00000447698 TLE2Q04725 743 aa26.95■■□□□ 1.9
STRADB-204ENST00000447698 PPP2R5BQ15173 497 aa26.95■■□□□ 1.9
STRADB-204ENST00000447698 HABP4Q5JVS0 413 aaKnown RBP26.95■■□□□ 1.9
STRADB-204ENST00000447698 GLT1D1Q96MS3 346 aa26.95■■□□□ 1.9
STRADB-204ENST00000447698 PDCD2LQ9BRP1 358 aa26.95■■□□□ 1.9
STRADB-204ENST00000447698 RBM27Q9P2N5 1060 aaKnown RBP26.95■■□□□ 1.9
STRADB-204ENST00000447698 TXNP10599 105 aaKnown RBP26.94■■□□□ 1.9
STRADB-204ENST00000447698 FUT2Q10981 343 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 TTLL4Q14679 1199 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 CXCL17Q6UXB2 119 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 OR6J1Q8NGC5 347 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 IL31RAQ8NI17 732 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 PRO3102Q9H379 93 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 ZSWIM6Q9HCJ5 1215 aa26.94■■□□□ 1.9
STRADB-204ENST00000447698 RANBP2P49792 3224 aaKnown RBP26.94■■□□□ 1.9
STRADB-204ENST00000447698 MAGEA10P43363 369 aaPredicted RBP26.93■■□□□ 1.9
STRADB-204ENST00000447698 PGM5Q15124 567 aa26.93■■□□□ 1.9
STRADB-204ENST00000447698 CCDC62Q6P9F0 684 aa26.93■■□□□ 1.9
STRADB-204ENST00000447698 USP17L6PQ6QN14 398 aa26.93■■□□□ 1.9
STRADB-204ENST00000447698 RUFY3Q7L099 469 aa26.93■■□□□ 1.9
STRADB-204ENST00000447698 GPKOWQ92917 476 aaPredicted RBP eCLIP26.93■■□□□ 1.9
STRADB-204ENST00000447698 ZFP91Q96JP5 570 aaPredicted RBP26.93■■□□□ 1.9
STRADB-204ENST00000447698 AGXT2Q9BYV1 514 aa26.93■■□□□ 1.9
STRADB-204ENST00000447698 ELP1O95163 1332 aa26.92■■□□□ 1.9
STRADB-204ENST00000447698 PQBP1O60828 265 aaKnown RBP26.92■■□□□ 1.9
STRADB-204ENST00000447698 EIF3JO75822 258 aaKnown RBP26.92■■□□□ 1.9
STRADB-204ENST00000447698 ADD1P35611 737 aaKnown RBP26.92■■□□□ 1.9
STRADB-204ENST00000447698 METAP2P50579 478 aaKnown RBP eCLIP26.92■■□□□ 1.9
STRADB-204ENST00000447698 RCAN1P53805 252 aa26.92■■□□□ 1.9
STRADB-204ENST00000447698 LY6KQ17RY6 165 aa26.92■■□□□ 1.9
STRADB-204ENST00000447698 HEATR3Q7Z4Q2 680 aa26.92■■□□□ 1.9
STRADB-204ENST00000447698 FBXL16Q8N461 479 aa26.92■■□□□ 1.9
STRADB-204ENST00000447698 GDF15Q99988 308 aa26.92■■□□□ 1.9
STRADB-204ENST00000447698 PRDM5Q9NQX1 630 aaPredicted RBP26.92■■□□□ 1.9
STRADB-204ENST00000447698 V9GY48 417 aaPredicted RBP26.92■■□□□ 1.9
STRADB-204ENST00000447698 MEIS2O14770 477 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 NKRFO15226 690 aaKnown RBP eCLIP26.91■■□□□ 1.9
STRADB-204ENST00000447698 ZEB2O60315 1214 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 SH3RF1Q7Z6J0 888 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 VSIG10LQ86VR7 867 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 SMARCC2Q8TAQ2 1214 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 CUL5Q93034 780 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 UPF3BQ9BZI7 483 aaKnown RBP26.91■■□□□ 1.9
STRADB-204ENST00000447698 PDLIM7Q9NR12 457 aa26.91■■□□□ 1.9
STRADB-204ENST00000447698 MDM2Q00987 491 aaPredicted RBP26.9■■□□□ 1.9
STRADB-204ENST00000447698 PSTPIP2Q9H939 334 aa26.9■■□□□ 1.9
STRADB-204ENST00000447698 PRKAG2Q9UGJ0 569 aa26.9■■□□□ 1.9
STRADB-204ENST00000447698 CYP46A1Q9Y6A2 500 aa26.9■■□□□ 1.9
STRADB-204ENST00000447698 MYH7BA7E2Y1 1941 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms