RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SEPHS1P49903 392 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 MECP2P51608 486 aaKnown RBP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 KPNA1P52294 538 aaPredicted RBP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 PCBP2Q15366 365 aaKnown RBP eCLIP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 E4F1Q66K89 784 aaPredicted RBP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 OVCH1Q7RTY7 1134 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 C11orf74Q86VG3 221 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 RCBTB1Q8NDN9 531 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 DIO2Q92813 273 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 AHCYL2Q96HN2 611 aaKnown RBP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 FAM46AQ96IP4 442 aaKnown RBP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 COX4I2Q96KJ9 171 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 SLC12A9Q9BXP2 914 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 HDAC8Q9BY41 377 aa8.23□□□□□ -1.09
COL11A1-205ENST00000447608 PRDM5Q9NQX1 630 aaPredicted RBP8.23□□□□□ -1.09
COL11A1-205ENST00000447608 PTPDC1A2A3K4 754 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 CCDC66A2RUB6 948 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 VSTM5A8MXK1 200 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 FZD9O00144 591 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 GNB5O14775 395 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 ULK1O75385 1050 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 SNUPNO95149 360 aaKnown RBP8.22□□□□□ -1.09
COL11A1-205ENST00000447608 OCRLQ01968 901 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 FAPQ12884 760 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 KLF1Q13351 362 aaPredicted RBP8.22□□□□□ -1.09
COL11A1-205ENST00000447608 CLEC16AQ2KHT3 1053 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 CXorf57Q6NSI4 855 aaKnown RBP8.22□□□□□ -1.09
COL11A1-205ENST00000447608 Q6ZS46 218 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.22□□□□□ -1.09
COL11A1-205ENST00000447608 DGKHQ86XP1 1220 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 CLRN3Q8NCR9 226 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 OBP2AQ9NY56 170 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 H2AFY2Q9P0M6 372 aaPredicted RBP8.22□□□□□ -1.09
COL11A1-205ENST00000447608 USP21Q9UK80 565 aa8.22□□□□□ -1.09
COL11A1-205ENST00000447608 SCRIBQ14160 1630 aa8.21□□□□□ -1.09
COL11A1-205ENST00000447608 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.21□□□□□ -1.1
COL11A1-205ENST00000447608 PRR33A8MZF0 331 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 LDHAP00338 332 aaKnown RBP8.21□□□□□ -1.1
COL11A1-205ENST00000447608 SOD2P04179 222 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 BMP3P12645 472 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 VAV1P15498 845 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 MAP4P27816 1152 aaKnown RBP8.21□□□□□ -1.1
COL11A1-205ENST00000447608 KIR3DL1P43629 444 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 KCNAB2Q13303 367 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 KIZQ2M2Z5 673 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 PRRT3Q5FWE3 981 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 TSHZ1Q6ZSZ6 1077 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 FAM214BQ7L5A3 538 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 KSR1Q8IVT5 923 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 CISD2Q8N5K1 135 aaKnown RBP8.21□□□□□ -1.1
COL11A1-205ENST00000447608 SAMD3Q8N6K7 520 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 ZNF655Q8N720 491 aaPredicted RBP8.21□□□□□ -1.1
COL11A1-205ENST00000447608 DAGLBQ8NCG7 672 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 ENOX1Q8TC92 643 aaKnown RBP8.21□□□□□ -1.1
COL11A1-205ENST00000447608 SLC13A1Q9BZW2 595 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 IPPKQ9H8X2 491 aa8.21□□□□□ -1.1
COL11A1-205ENST00000447608 FAM95CA0A1B0GW59 222 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 FAM87AP0C7U9 286 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 PF4V1P10720 104 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 SESN3P58005 492 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 ST5P78524 1137 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 TNK2Q07912 1038 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 BRD3Q15059 726 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 NFKBIBQ15653 356 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 INF2Q27J81 1249 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 FAM47CQ5HY64 1035 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 IQCEQ6IPM2 695 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 RCSD1Q6JBY9 416 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 FBXW5Q969U6 566 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 TCTN2Q96GX1 697 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 FAXDC2Q96IV6 333 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 TCF7L1Q9HCS4 588 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 ENAMQ9NRM1 1142 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 OXSMQ9NWU1 459 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
COL11A1-205ENST00000447608 WNT9AO14904 365 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 CREB3O43889 395 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 GSTM1P09488 218 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 BMP8BP34820 402 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 IREB2P48200 963 aaKnown RBP8.19□□□□□ -1.1
COL11A1-205ENST00000447608 CREB3L3Q68CJ9 461 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 PGM2L1Q6PCE3 622 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 CPA6Q8N4T0 437 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 C2orf69Q8N8R5 385 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 C1orf162Q8NEQ5 155 aaPredicted RBP8.19□□□□□ -1.1
COL11A1-205ENST00000447608 SLC5A5Q92911 643 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 GPATCH2Q9NW75 528 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 C14orf119Q9NWQ9 140 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 PPARGC1AQ9UBK2 798 aaKnown RBP8.19□□□□□ -1.1
COL11A1-205ENST00000447608 ANKRD6Q9Y2G4 727 aa8.19□□□□□ -1.1
COL11A1-205ENST00000447608 TGM5O43548 720 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL11A1-205ENST00000447608 NOS3P29474 1203 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 RECQLP46063 649 aaPredicted RBP8.18□□□□□ -1.1
COL11A1-205ENST00000447608 ODF1Q14990 250 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 DDB1Q16531 1140 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 RTP2Q5QGT7 225 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 BROXQ5VW32 411 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 EEF1DP3Q658K8 133 aa8.18□□□□□ -1.1
COL11A1-205ENST00000447608 ZNF385CQ66K41 422 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms